RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ABCB6Q9NP58 842 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 DLGAP2Q9P1A6 1054 aa20.34■□□□□ 0.85
CLN6-221ENST00000637494 KIF20AO95235 890 aa20.33■□□□□ 0.85
CLN6-221ENST00000637494 CD72P21854 359 aa20.33■□□□□ 0.85
CLN6-221ENST00000637494 ACAT1P24752 427 aaKnown RBP20.33■□□□□ 0.85
CLN6-221ENST00000637494 CYP24A1Q07973 514 aa20.33■□□□□ 0.85
CLN6-221ENST00000637494 TRPC3Q13507 836 aa20.33■□□□□ 0.85
CLN6-221ENST00000637494 MAPRE1Q15691 268 aaKnown RBP20.33■□□□□ 0.85
CLN6-221ENST00000637494 ZC3H14Q6PJT7 736 aaKnown RBP20.33■□□□□ 0.85
CLN6-221ENST00000637494 C4orf50Q6ZRC1 276 aa20.33■□□□□ 0.85
CLN6-221ENST00000637494 TRAPPC11Q7Z392 1133 aa20.33■□□□□ 0.85
CLN6-221ENST00000637494 ARID3BQ8IVW6 561 aaPredicted RBP20.33■□□□□ 0.85
CLN6-221ENST00000637494 CXorf38Q8TB03 319 aa20.33■□□□□ 0.85
CLN6-221ENST00000637494 TASP1Q9H6P5 420 aa20.33■□□□□ 0.85
CLN6-221ENST00000637494 SPATA6Q9NWH7 488 aaPredicted RBP20.33■□□□□ 0.85
CLN6-221ENST00000637494 UXTQ9UBK9 157 aaPredicted RBP20.33■□□□□ 0.85
CLN6-221ENST00000637494 NRG2O14511 850 aaPredicted RBP20.32■□□□□ 0.84
CLN6-221ENST00000637494 CHADO15335 359 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 LAMTOR5O43504 91 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 ACTN4O43707 911 aaKnown RBP20.32■□□□□ 0.84
CLN6-221ENST00000637494 PHACTR2O75167 634 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 CLSTN1O94985 981 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 GLULP15104 373 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 SYKP43405 635 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 TNNC1P63316 161 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 BECN1Q14457 450 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 SOWAHAQ2M3V2 549 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 STXBP5Q5T5C0 1151 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 C1orf228Q6PIY5 440 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 C12orf56Q8IXR9 622 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 MSANTD3Q96H12 275 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 CCDC34Q96HJ3 373 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 FAM84AQ96KN4 292 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 TMLHEQ9NVH6 421 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 THG1LQ9NWX6 298 aaKnown RBP20.32■□□□□ 0.84
CLN6-221ENST00000637494 OBP2AQ9NY56 170 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 GTF3C4Q9UKN8 822 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 CDH9Q9ULB4 789 aa20.32■□□□□ 0.84
CLN6-221ENST00000637494 MAGED2Q9UNF1 606 aaPredicted RBP20.32■□□□□ 0.84
CLN6-221ENST00000637494 PTPRJQ12913 1337 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 GABRDO14764 452 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 LRRN2O75325 713 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 DDX6P26196 483 aaKnown RBP eCLIP20.31■□□□□ 0.84
CLN6-221ENST00000637494 WEE1P30291 646 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 CYP4F8P98187 520 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 ARHGAP29Q52LW3 1261 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 FAM3CQ92520 227 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 MRPS31Q92665 395 aaKnown RBP20.31■□□□□ 0.84
CLN6-221ENST00000637494 FUBP3Q96I24 572 aaKnown RBP eCLIP20.31■□□□□ 0.84
CLN6-221ENST00000637494 SYT15Q9BQS2 421 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 SNX25Q9H3E2 840 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 SEMA4AQ9H3S1 761 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 NDRG2Q9UN36 371 aaKnown RBP20.31■□□□□ 0.84
CLN6-221ENST00000637494 PIAS3Q9Y6X2 628 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 MIA3Q5JRA6 1907 aa20.31■□□□□ 0.84
CLN6-221ENST00000637494 TARSP26639 723 aaKnown RBP20.3■□□□□ 0.84
CLN6-221ENST00000637494 AVPR1AP37288 418 aa20.3■□□□□ 0.84
CLN6-221ENST00000637494 RPS9P46781 194 aaKnown RBP20.3■□□□□ 0.84
CLN6-221ENST00000637494 KPNA1P52294 538 aaPredicted RBP20.3■□□□□ 0.84
CLN6-221ENST00000637494 AP3M2P53677 418 aa20.3■□□□□ 0.84
CLN6-221ENST00000637494 FCHO2Q0JRZ9 810 aa20.3■□□□□ 0.84
CLN6-221ENST00000637494 KMT5BQ4FZB7 885 aa20.3■□□□□ 0.84
CLN6-221ENST00000637494 CFAP221Q4G0U5 840 aa20.3■□□□□ 0.84
CLN6-221ENST00000637494 OSTM1Q86WC4 334 aa20.3■□□□□ 0.84
CLN6-221ENST00000637494 MAGEC2Q9UBF1 373 aaPredicted RBP20.3■□□□□ 0.84
CLN6-221ENST00000637494 MTF2Q9Y483 593 aaPredicted RBP20.3■□□□□ 0.84
CLN6-221ENST00000637494 PRR23AA6NEV1 266 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 SOBPA7XYQ1 873 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 KLRC4O43908 158 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 FAM163BP0C2L3 166 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 WARSP23381 471 aaKnown RBP20.29■□□□□ 0.84
CLN6-221ENST00000637494 CYP2F1P24903 491 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 MLLT6P55198 1093 aaPredicted RBP20.29■□□□□ 0.84
CLN6-221ENST00000637494 NLRP12P59046 1061 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 PLCB2Q00722 1185 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 STK4Q13043 487 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 DDR2Q16832 855 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 GPIHBP1Q8IV16 184 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 SCN4BQ8IWT1 228 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 CELF5Q8N6W0 485 aaKnown RBP20.29■□□□□ 0.84
CLN6-221ENST00000637494 BPIFB1Q8TDL5 484 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 SYAP1Q96A49 352 aaPredicted RBP20.29■□□□□ 0.84
CLN6-221ENST00000637494 C8orf33Q9H7E9 229 aaPredicted RBP20.29■□□□□ 0.84
CLN6-221ENST00000637494 IL21Q9HBE4 155 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 HPSEQ9Y251 543 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 ZDHHC9Q9Y397 364 aa20.29■□□□□ 0.84
CLN6-221ENST00000637494 RPN1P04843 607 aaKnown RBP20.28■□□□□ 0.84
CLN6-221ENST00000637494 PDGFRBP09619 1106 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 SP9P0CG40 484 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 ANXA13P27216 316 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 ATICP31939 592 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 MAGEA11P43364 429 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 BIRC3Q13489 604 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 WDR72Q3MJ13 1102 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 SCARA3Q6AZY7 606 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 CMTM8Q8IZV2 173 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 FSIP1Q8NA03 581 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 OR6B3Q8NGW1 331 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 CLDN23Q96B33 292 aa20.28■□□□□ 0.84
CLN6-221ENST00000637494 MKNK1Q9BUB5 465 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms