RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 DNAJC3Q13217 504 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 FAM110CQ1W6H9 321 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ITPRIPL1Q6GPH6 555 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 BBS12Q6ZW61 710 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 PGBD4Q96DM1 585 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 L3MBTL3Q96JM7 780 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 NOD1Q9Y239 953 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RAD54BQ9Y620 910 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 NRXN2Q9P2S2 1712 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MANSC4A6NHS7 340 aaPredicted RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF487B1APH4 448 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 NCAM2O15394 837 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 RARAP10276 462 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ITGA8P53708 1063 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CORO7P57737 925 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CNTN2Q02246 1040 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SLC29A2Q14542 456 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 PRPSAP1Q14558 356 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MON1BQ7L1V2 547 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 TEKT4Q8WW24 435 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CALN1Q9BXU9 219 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 DPP3Q9NY33 737 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 BCAP29Q9UHQ4 241 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 A8MXQ7 604 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 APOL1O14791 398 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MT-ND3P03897 115 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 CYP3A5P20815 502 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MARK3P27448 753 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 FDFT1P37268 417 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MAGEA4P43358 317 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ARSEP51690 589 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 BCAT1P54687 386 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ANKRD20A3Q5VUR7 823 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 ZCCHC9Q8N567 271 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 C1orf54Q8WWF1 131 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 SSU72Q9NP77 194 aaKnown RBP4.79□□□□□ -1.64
SCN1A-210ENST00000635776 MORF4L1Q9UBU8 362 aa4.79□□□□□ -1.64
SCN1A-210ENST00000635776 IGKV6-21A0A0C4DH24 114 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 LGALS2P05162 132 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 PYGMP11217 842 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 GSCP56915 257 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-210ENST00000635776 ATP11AP98196 1134 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 CDK16Q00536 496 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 NAB1Q13506 487 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 SNX1Q13596 522 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 DUSP28Q4G0W2 176 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 KAZNQ674X7 775 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 SCYL2Q6P3W7 929 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 APPL2Q8NEU8 664 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 TRPM4Q8TD43 1214 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 NSMCE1Q8WV22 266 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MCEEQ96PE7 176 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 PCDHB18PQ96TA0 734 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 RCOR3Q9P2K3 495 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-210ENST00000635776 NUB1Q9Y5A7 615 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 RASA4BC9J798 803 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 RASA4O43374 803 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 ITGAVP06756 1048 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 INSRRP14616 1297 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MNAT1P51948 309 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 ACBD5Q5T8D3 534 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-210ENST00000635776 AFAP1L2Q8N4X5 818 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 SPATA18Q8TC71 538 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 CELF4Q9BZC1 486 aaKnown RBP4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MTMR12Q9C0I1 747 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MYH1P12882 1939 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MSCO60682 206 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 ZWINTO95229 277 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 CPP00450 1065 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 CYP2C9P11712 490 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 ITGA4P13612 1032 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 PCSK1P29120 753 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 PTPROQ16827 1216 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 EFHC2Q5JST6 749 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 C7orf31Q8N865 590 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MYCBPAPQ8TBZ2 947 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 BSNDQ8WZ55 320 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 EMID1Q96A84 441 aaPredicted RBP4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MTBPQ96DY7 904 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 DDX27Q96GQ7 796 aaKnown RBP4.78□□□□□ -1.64
SCN1A-210ENST00000635776 SEZ6LQ9BYH1 1024 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 SMARCAL1Q9NZC9 954 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 ARL2BPQ9Y2Y0 163 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 ZNF541Q9H0D2 1346 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 HACD1B0YJ81 288 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 NR2C2P49116 596 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 BST2Q10589 180 aaKnown RBP4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MFSD14CQ5VZR4 134 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 SLC51AQ86UW1 340 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 THEM5Q8N1Q8 247 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 SH2D3AQ9BRG2 576 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 PPP1R12CQ9BZL4 782 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 CDT1Q9H211 546 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 COL4A1P02462 1669 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 FAM47DPA6NHR8 397 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 MYBL2P10244 700 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 RBP3P10745 1247 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 CYP2C18P33260 490 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 SLC18A1P54219 525 aa4.78□□□□□ -1.64
SCN1A-210ENST00000635776 CCDC38Q502W7 563 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms