RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 XRCC4Q13426 336 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 LAMB3Q13751 1172 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 CCNG2Q16589 344 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 VPS52Q8N1B4 723 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 CCHCR1Q8TD31 782 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 DDX1Q92499 740 aaKnown RBP15.2■□□□□ 0.02
PTBP1-221ENST00000635647 DDX27Q96GQ7 796 aaKnown RBP15.2■□□□□ 0.02
PTBP1-221ENST00000635647 NAF1Q96HR8 494 aaKnown RBP15.2■□□□□ 0.02
PTBP1-221ENST00000635647 RBM41Q96IZ5 413 aaKnown RBP15.2■□□□□ 0.02
PTBP1-221ENST00000635647 MFSD14AQ96MC6 490 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 PIH1D1Q9NWS0 290 aaKnown RBP15.2■□□□□ 0.02
PTBP1-221ENST00000635647 HAO1Q9UJM8 370 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 CLCN3P51790 818 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 MCUR1Q96AQ8 359 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 NPHS2Q9NP85 383 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 CHMP2BQ9UQN3 213 aa15.2■□□□□ 0.02
PTBP1-221ENST00000635647 H0YCG3 227 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 CST8O60676 142 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 DESP17661 470 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 TNFSF9P41273 254 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 CYP1B1Q16678 543 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 HADHQ16836 314 aaKnown RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 XKR3Q5GH77 459 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 FYB2Q5VWT5 728 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 B3GNT9Q6UX72 402 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 FITM2Q8N6M3 262 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 PRPF31Q8WWY3 499 aaKnown RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 METTL5Q9NRN9 209 aaKnown RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 KRT16P08779 473 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 SSTR1P30872 391 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 CENPCQ03188 943 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 LY6KQ17RY6 165 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 LACTB2Q53H82 288 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 FAM102AQ5T9C2 384 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 PPM1NQ8N819 430 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 ASAP3Q8TDY4 903 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 CKAP2Q8WWK9 683 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 MAML1Q92585 1016 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 TEX13BQ9BXU2 312 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 APOBEC3GQ9HC16 384 aaKnown RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 KIAA1586Q9HCI6 787 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 XPNPEP1Q9NQW7 623 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 FAM49BQ9NUQ9 324 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 GPATCH2LQ9NWQ4 482 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 PHTF1Q9UMS5 762 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 ATP8B3O60423 1300 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 M0QYV0 167 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 UNGP13051 313 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 KRT4P19013 534 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 GARTP22102 1010 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 ZRSR2Q15696 482 aaKnown RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 GJC2Q5T442 439 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 SYDE1Q6ZW31 735 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 VSIG10LQ86VR7 867 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 GBP7Q8N8V2 638 aaPredicted RBP15.19■□□□□ 0.02
PTBP1-221ENST00000635647 ATXN7L3BQ96GX2 97 aa15.19■□□□□ 0.02
PTBP1-221ENST00000635647 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.19■□□□□ 0.023e-7■■□□□ 11.9
PTBP1-221ENST00000635647 CNTNAP1P78357 1384 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 INHBAP08476 426 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 CCND1P24385 295 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 NRLP54845 237 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 NCALDP61601 193 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 SLFN12LQ6IEE8 588 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 NIPA1Q7RTP0 329 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 NLRP7Q8WX94 980 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 PTPRJQ12913 1337 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 MTA2O94776 668 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 HIF1AQ16665 826 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 ZACNQ401N2 412 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 ZNF667Q5HYK9 610 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 TXNRD3NBQ6F5E7 133 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 LVRNQ6Q4G3 990 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 RCOR2Q8IZ40 523 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 TMEM130Q8N3G9 435 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 FAM71DQ8N9W8 422 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 HIPK4Q8NE63 616 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 BAG2O95816 211 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 KRT3P12035 628 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 NOMO3P69849 1222 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 C3orf62Q6ZUJ4 267 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 ANKRD36BP1Q96IX9 119 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 ELP3Q9H9T3 547 aa15.18■□□□□ 0.02
PTBP1-221ENST00000635647 A0A1W2PPM1 405 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 CFAP69A5D8W1 941 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 PSTPIP1O43586 416 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 CST3P01034 146 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-221ENST00000635647 RPA3P35244 121 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-221ENST00000635647 BAG6P46379 1132 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 CPA2P48052 419 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 CDH6P55285 790 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 NME8Q8N427 588 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 PAF1Q8N7H5 531 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 B4GALNT2Q8NHY0 566 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 ZNF570Q96NI8 536 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 UBN1Q9NPG3 1134 aa15.17■□□□□ 0.02
PTBP1-221ENST00000635647 MAPK13O15264 365 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms