RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 CCNA1P78396 465 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 MORF4L2Q15014 288 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 HIBCHQ6NVY1 386 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 USP50Q70EL3 339 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 GSTA5Q7RTV2 222 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 APBB1IPQ7Z5R6 666 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 CPLX4Q7Z7G2 160 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 PCGF5Q86SE9 256 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 LRRC71Q8N4P6 559 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 ALLCQ8N6M5 410 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 ANKS4BQ8N8V4 417 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 ATXN2LQ8WWM7 1075 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 CFAP57Q96MR6 1250 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 MCEEQ96PE7 176 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 INO80BQ9C086 356 aaPredicted RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 R3HDM2Q9Y2K5 976 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 RALGAPA2Q2PPJ7 1873 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 PLXNA1Q9UIW2 1896 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 hCG_1818297A0A087WSY0 165 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 CDH16O75309 829 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 CD58P19256 250 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 DRD4P21917 467 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 VCPP55072 806 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 ITIH4Q14624 930 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 EFCAB12Q6NXP0 572 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 CCDC121Q6ZUS5 278 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 THNSL1Q8IYQ7 743 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 EPS8L3Q8TE67 593 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 SEC16BQ96JE7 1060 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 NLRP4Q96MN2 994 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 HERPUD2Q9BSE4 406 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 HEMGNQ9BXL5 484 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 ADAM7Q9H2U9 754 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 PCDH9Q9HC56 1237 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 DDX20Q9UHI6 824 aaKnown RBP13.07□□□□□ -0.32
PTPN11-205ENST00000635625 KIAA1257Q9ULG3 409 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 SLC45A1Q9Y2W3 748 aa13.07□□□□□ -0.32
PTPN11-205ENST00000635625 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 GOLGA6L7A0A1B0GV03 622 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 RBM47A0AV96 593 aaKnown RBP13.06□□□□□ -0.32
PTPN11-205ENST00000635625 DNALI1O14645 258 aaPredicted RBP13.06□□□□□ -0.32
PTPN11-205ENST00000635625 GH1P01241 217 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 RPL7AP62424 266 aaKnown RBP13.06□□□□□ -0.32
PTPN11-205ENST00000635625 ZNF252P-AS1Q0IIN9 211 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 MOGSQ13724 837 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 ZNF268Q14587 947 aaPredicted RBP13.06□□□□□ -0.32
PTPN11-205ENST00000635625 STILQ15468 1287 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 TAZQ16635 292 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 SEZ6Q53EL9 994 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 LLGL2Q6P1M3 1020 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 EEPD1Q7L9B9 569 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 TRIM50Q86XT4 487 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 FBXO16Q8IX29 292 aaPredicted RBP13.06□□□□□ -0.32
PTPN11-205ENST00000635625 LINC01465Q8N7H1 131 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 CABS1Q96KC9 395 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 ZNF317Q96PQ6 595 aaPredicted RBP13.06□□□□□ -0.32
PTPN11-205ENST00000635625 RABEP2Q9H5N1 569 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 UBN1Q9NPG3 1134 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 NINJ2Q9NZG7 142 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 ITGA11Q9UKX5 1188 aa13.06□□□□□ -0.32
PTPN11-205ENST00000635625 MCM3APO60318 1980 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 ACSL3O95573 720 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 HMGCRP04035 888 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 PGK2P07205 417 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 GHRP10912 638 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 CHKAP35790 457 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 CDKN2BP42772 138 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 ARHGAP1Q07960 439 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 SNAPC2Q13487 334 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 RASA2Q15283 850 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 C2CD6Q53TS8 623 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 ZFYVE27Q5T4F4 411 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 PHLDB2Q86SQ0 1253 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 TDRPQ86YL5 185 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 CCDC197Q8NCU1 140 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 PLCD4Q9BRC7 762 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 TXNRD2Q9NNW7 524 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 SENP1Q9P0U3 644 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 TPX2Q9ULW0 747 aaKnown RBP13.05□□□□□ -0.32
PTPN11-205ENST00000635625 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
PTPN11-205ENST00000635625 KRT3P12035 628 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 ATF7P17544 494 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 PSMA2P25787 234 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 GJC1P36383 396 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 GABRB2P47870 512 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 IFI35P80217 286 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 OASLQ15646 514 aaKnown RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 CNGA2Q16280 664 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 LACTB2Q53H82 288 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 MFSD7Q6UXD7 560 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 MICALL1Q8N3F8 863 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 WDTC1Q8N5D0 677 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 TFAP2BQ92481 460 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms