RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 PODXLO00592 558 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 ATMINO43313 823 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-230ENST00000634433 POLR2BP30876 1174 aaKnown RBP7.58□□□□□ -1.2
BRCA1-230ENST00000634433 CARSP49589 748 aaKnown RBP7.58□□□□□ -1.2
BRCA1-230ENST00000634433 CLK1P49759 484 aaKnown RBP7.58□□□□□ -1.2
BRCA1-230ENST00000634433 ZNF157P51786 506 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-230ENST00000634433 IL31Q6EBC2 164 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 RNF217Q8TC41 542 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 SH3TC2Q8TF17 1288 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 CASKIN2Q8WXE0 1202 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 ALG3Q92685 438 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 ELMO3Q96BJ8 720 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 TIFAQ96CG3 184 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 ACAP3Q96P50 834 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 DDX47Q9H0S4 455 aaKnown RBP7.58□□□□□ -1.2
BRCA1-230ENST00000634433 PDZD7Q9H5P4 517 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 NFU1Q9UMS0 254 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 PCDHGC3Q9UN70 934 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 Q9Y3F1 56 aa7.58□□□□□ -1.2
BRCA1-230ENST00000634433 A0A1B0GUA9 196 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 MOXD2PA6NHM9 499 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 BHMG1C9JSJ3 638 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 DYNC1LI2O43237 492 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PHF2O75151 1096 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PROSCO94903 275 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 VTNP04004 478 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 KRT19P08727 400 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 SLC10A3P09131 477 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PAEPP09466 180 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 CXCL8P10145 99 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 EIF4BP23588 611 aaKnown RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 NEK3P51956 506 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 OSTNP61366 133 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 MRPS25P82663 173 aaKnown RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 LACTBP83111 547 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 WASHC5Q12768 1159 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PTP4A2Q12974 167 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 SERINC3Q13530 473 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 HLTFQ14527 1009 aaKnown RBP eCLIP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 TAF1CQ15572 869 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 DCAF12L1Q5VU92 463 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 OLFML2BQ68BL8 750 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PLEKHA7Q6IQ23 1121 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 EP400NLQ6ZTU2 488 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 SNX32Q86XE0 403 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 GSPT2Q8IYD1 628 aaKnown RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 KIAA0319LQ8IZA0 1049 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 ZNF668Q96K58 619 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 FAM84AQ96KN4 292 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 AP5M1Q9H0R1 490 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PLEKHA5Q9HAU0 1116 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 CPA4Q9UI42 421 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 ITGA11Q9UKX5 1188 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 DERAQ9Y315 318 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 C2CD2Q9Y426 696 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 UMODL1Q5DID0 1318 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 SMIM35A0A1B0GVV1 85 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 FAM155AB1AL88 458 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 GOLGA8KD6RF30 607 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 H3BQF6 201 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PSTPIP1O43586 416 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 STAU1O95793 577 aaKnown RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 IQCF3P0C7M6 154 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 ITGA4P13612 1032 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 GLULP15104 373 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 ARF4P18085 180 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 CD58P19256 250 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 AXLP30530 894 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 RGS2P41220 211 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 CPT1AP50416 773 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 RAB27AP51159 221 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 DRG2P55039 364 aaKnown RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 RBP5P82980 135 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 DR1Q01658 176 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 TMEM132DQ14C87 1099 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PLEKHG4Q58EX7 1191 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 HABP4Q5JVS0 413 aaKnown RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 CFAP58Q5T655 872 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 SLC13A5Q86YT5 568 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 FEZF2Q8TBJ5 459 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PPM1EQ8WY54 764 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 SEC14L1Q92503 715 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 KRT35Q92764 455 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 EXOC4Q96A65 974 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 MAGOHBQ96A72 148 aaKnown RBP7.57□□□□□ -1.2
BRCA1-230ENST00000634433 C11orf70Q9BRQ4 267 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 KATNAL1Q9BW62 490 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 FAM129AQ9BZQ8 928 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 XYLT2Q9H1B5 865 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 LHX5Q9H2C1 402 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 HOMER3Q9NSC5 361 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 RNF186Q9NXI6 227 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 PSD3Q9NYI0 1048 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 CNTN3Q9P232 1028 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 AMACRQ9UHK6 382 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 STRIP2Q9ULQ0 834 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 ZNF236Q9UL36 1845 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 MROH7Q68CQ1 1323 aa7.57□□□□□ -1.2
BRCA1-230ENST00000634433 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
BRCA1-230ENST00000634433 ATP9BO43861 1147 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms