RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	PACS2	Q86VP3	889 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	NT5DC4	Q86YG4	428 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	EFCAB13	Q8IY85	973 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	GPR161	Q8N6U8	529 aa	Known RBP	11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	ZBTB44	Q8NCP5	570 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	GIPC2	Q8TF65	315 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	RMDN1	Q96DB5	314 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	EPC1	Q9H2F5	836 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	IKZF4	Q9H2S9	585 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	KDM4C	Q9H3R0	1056 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	THG1L	Q9NWX6	298 aa	Known RBP	11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	GMEB2	Q9UKD1	530 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	STYXL1	Q9Y6J8	313 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	F5	P12259	2224 aa		11.17	□□□□□ -0.62
UBE3A-223	ENST00000631247	MYMK	A6NI61	221 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	SPECC1L-ADORA2A	F8WAN1	911 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	ARNTL	O00327	626 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	GPR37	O15354	613 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	HUS1	O60921	280 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	LDHA	P00338	332 aa	Known RBP	11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	ITGB3	P05106	788 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	ATF6	P18850	670 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	SYT1	P21579	422 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	POLR2B	P30876	1174 aa	Known RBP	11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	AVPR1A	P37288	418 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	CXCL12	P48061	93 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	SOX9	P48436	509 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	MYL7	Q01449	175 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	REST	Q13127	1097 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	FZD5	Q13467	585 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	PTPA	Q15257	358 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	TSR1	Q2NL82	804 aa	Known RBP	11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	WSCD1	Q658N2	575 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	FAM173B	Q6P4H8	233 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	STXBP4	Q6ZWJ1	553 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	GAREM2	Q75VX8	874 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	BRSK2	Q8IWQ3	736 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	CCDC65	Q8IXS2	484 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	TTC8	Q8TAM2	541 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	BPIFB1	Q8TDL5	484 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	CACTIN	Q8WUQ7	758 aa	Known RBP	11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	RSPRY1	Q96DX4	576 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	SAAL1	Q96ER3	474 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	ZFYVE19	Q96K21	471 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	CLIC6	Q96NY7	704 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	TASP1	Q9H6P5	420 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	OLFML3	Q9NRN5	406 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	OBP2A	Q9NY56	170 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	ZMYM5	Q9UJ78	669 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	USP18	Q9UMW8	372 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	PCDHB5	Q9Y5E4	795 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	GPR179	Q6PRD1	2367 aa		11.16	□□□□□ -0.62
UBE3A-223	ENST00000631247	SHISA7	A6NL88	538 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	LILRB5	O75023	590 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	PRAMEF12	O95522	483 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	KRT19	P08727	400 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	TMEM191B	P0C7N4	346 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	HAPLN1	P10915	354 aa	Predicted RBP	11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	CHRNB1	P11230	501 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	SDHB	P21912	280 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	ADSS	P30520	456 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	CTH	P32929	405 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	MLLT6	P55198	1093 aa	Predicted RBP	11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	LMNB2	Q03252	620 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	KCNA1	Q09470	495 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	BFSP1	Q12934	665 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	NFE2	Q16621	373 aa	Predicted RBP	11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	DGKK	Q5KSL6	1271 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	CRELD2	Q6UXH1	353 aa	Predicted RBP	11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	PRR23B	Q6ZRT6	265 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	NYAP1	Q6ZVC0	841 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	RALGPS2	Q86X27	583 aa	Predicted RBP	11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	CELF5	Q8N6W0	485 aa	Known RBP	11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	MRPS31	Q92665	395 aa	Known RBP	11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	PI4K2A	Q9BTU6	479 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	MKNK1	Q9BUB5	465 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	TMEM206	Q9H813	350 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	PANK4	Q9NVE7	773 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	GTSE1	Q9NYZ3	720 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	ITGA11	Q9UKX5	1188 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	AGAP1	Q9UPQ3	857 aa		11.15	□□□□□ -0.62
UBE3A-223	ENST00000631247	LAMA1	P25391	3075 aa		11.15	□□□□□ -0.63
UBE3A-223	ENST00000631247	KIF26A	Q9ULI4	1882 aa	Predicted RBP	11.15	□□□□□ -0.63
UBE3A-223	ENST00000631247	ZNF638	Q14966	1978 aa	Known RBP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	MYBPHL	A2RUH7	354 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	GOLGA8IP	A6NC78	632 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	GOLGA8J	A6NMD2	632 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	EXTL3	O43909	919 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	PRPF40A	O75400	957 aa	Known RBP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	CSH1	P0DML2	217 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	CSH2	P0DML3	217 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	GART	P22102	1010 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	DDX6	P26196	483 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	CASP5	P51878	434 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	SATB1	Q01826	763 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	STK38	Q15208	465 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	LPAL2	Q16609	132 aa		11.14	□□□□□ -0.63
UBE3A-223	ENST00000631247	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms