RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 LINC01465Q8N7H1 131 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 CRYGNQ8WXF5 182 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 SLC5A5Q92911 643 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 MYADMQ96S97 322 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 MUC3BQ9H195 1237 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 FOXP1Q9H334 677 aaPredicted RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 KNL1Q8NG31 2342 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 PSMD10O75832 226 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 ATE1O95260 518 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 MAP3K6O95382 1288 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 LMNAP02545 664 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 CIITAP33076 1130 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 QARSP47897 775 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 GSDMDP57764 484 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 GIT2Q14161 759 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 LPAL2Q16609 132 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 ARSJQ5FYB0 599 aaPredicted RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 SNAP47Q5SQN1 464 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 PIK3AP1Q6ZUJ8 805 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 DGLUCYQ7Z3D6 616 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 REC114Q7Z4M0 266 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 ZNF410Q86VK4 478 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 SLC30A3Q99726 388 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 RTP3Q9BQQ7 232 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 LXNQ9BS40 222 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 NXF3Q9H4D5 531 aaKnown RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 ST7Q9NRC1 585 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 FBXO2Q9UK22 296 aaPredicted RBP5.27□□□□□ -1.57
LINC00550-201ENST00000629293 DYRK1BQ9Y463 629 aa5.27□□□□□ -1.57
LINC00550-201ENST00000629293 MED19A0JLT2 244 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ARL5CA6NH57 179 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 CASTOR2A6NHX0 329 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 SMTNL1A8MU46 457 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 MAFO75444 373 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 TADA2AO75478 443 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 DEXIO95424 95 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 USP11P51784 963 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 CDC42EP1Q00587 391 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 TRIM29Q14134 588 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 EMC2Q15006 297 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 TARBP2Q15633 366 aaKnown RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 RPS26P11Q5JNZ5 115 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ELMSAN1Q6PJG2 1045 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PRSS55Q6UWB4 352 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 KRT25Q7Z3Z0 450 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 GRASPQ7Z6J2 395 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PDZD3Q86UT5 571 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 SLC44A3Q8N4M1 653 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ING5Q8WYH8 240 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ANKRD7Q92527 254 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 RMDN1Q96DB5 314 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 RPS6KC1Q96S38 1066 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 JPH2Q9BR39 696 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 RPP25Q9BUL9 199 aaKnown RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 RNF26Q9BY78 433 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 IFT122Q9HBG6 1241 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 POLD4Q9HCU8 107 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 BRMS1Q9HCU9 246 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ARHGEF3Q9NR81 526 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 AGPAT5Q9NUQ2 364 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PCDHA4Q9UN74 947 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 DUSP12Q9UNI6 340 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 SIT1Q9Y3P8 196 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 IPPQ9Y573 584 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 LRRIQ4A6NIV6 560 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 B2RBV5 119 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 CCL16O15467 120 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 B4GALT5O43286 388 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 EDIL3O43854 480 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 SOD2P04179 222 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 YWHABP31946 246 aaKnown RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 GPC5P78333 572 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PRR20EP86478 221 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PRR20CP86479 221 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PRR20DP86480 221 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PRR20BP86481 221 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PRR20AP86496 221 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 TNP2Q05952 138 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ZNF252P-AS1Q0IIN9 211 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 SYCP1Q15431 976 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 NT5DC1Q5TFE4 455 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 LIN9Q5TKA1 542 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 KRBA2Q6ZNG9 492 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 THNSL2Q86YJ6 484 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 DIS3L2Q8IYB7 885 aaKnown RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 CCDC105Q8IYK2 499 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 PIGOQ8TEQ8 1089 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 DYDC2Q96IM9 177 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 CLIC6Q96NY7 704 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 IER2Q9BTL4 223 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 GPR62Q9BZJ7 368 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 XPO4Q9C0E2 1151 aaKnown RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 ACTR10Q9NZ32 417 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 IGSF9Q9P2J2 1179 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 WRAP73Q9P2S5 460 aaPredicted RBP5.26□□□□□ -1.57
LINC00550-201ENST00000629293 IRAK3Q9Y616 596 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 NUMBLQ9Y6R0 609 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 DOCK8Q8NF50 2099 aa5.26□□□□□ -1.57
LINC00550-201ENST00000629293 CLUHO75153 1309 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms