RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PCDHB4Q9Y5E5 795 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 PCDHB2Q9Y5E7 798 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 PCDHGC5Q9Y5F6 944 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 MRFAP1Q9Y605 127 aa10.13□□□□□ -0.79
PDLIM5-223ENST00000627587 NCANO14594 1321 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 SMIM28A0A1B0GU29 152 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 ANO9A1A5B4 782 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 GRID2IPA4D2P6 1211 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 CTAGE9A4FU28 777 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 GPR182O15218 404 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 GRM6O15303 877 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 TACC1O75410 805 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 URI1O94763 535 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 STAU1O95793 577 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 H2AFZP0C0S5 128 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 UNGP13051 313 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 KCNE1P15382 129 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 ATF7P17544 494 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 ATICP31939 592 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 GTF2F1P35269 517 aaKnown RBP eCLIP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 TERF1P54274 439 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 CDH8P55286 799 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 WDR72Q3MJ13 1102 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 ZNF667Q5HYK9 610 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 H2AFVQ71UI9 128 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 ALYREFQ86V81 257 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 NPAS4Q8IUM7 802 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 RNF10Q8N5U6 811 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 LRRC57Q8N9N7 239 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 FAXDC2Q96IV6 333 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 ZFP42Q96MM3 310 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 ALS2CR12Q96Q35 445 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 NAPGQ99747 312 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 PRRX2Q99811 253 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 THAP2Q9H0W7 228 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 SMYD3Q9H7B4 428 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 CHST12Q9NRB3 414 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 FAM105AQ9NUU6 356 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 NXF1Q9UBU9 619 aaKnown RBP10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 HMGXB4Q9UGU5 601 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 CD207Q9UJ71 328 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 AGAP1Q9UPQ3 857 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 NME7Q9Y5B8 376 aa10.12□□□□□ -0.79
PDLIM5-223ENST00000627587 TTC3P53804 2025 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 A0A0A6YYK5 440 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 FTLP02792 175 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 CYP1A1P04798 512 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 TMEM253P0C7T8 217 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 GZMAP12544 262 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 P4HA1P13674 534 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 ZSCAN20P17040 1043 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 CD58P19256 250 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 IGFBP6P24592 240 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 NAP1L1P55209 391 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 YWHAEP62258 255 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 RBP5P82980 135 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 PAPD7Q5XG87 772 aaKnown RBP10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 SMYD5Q6GMV2 418 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 BMP8AQ7Z5Y6 402 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 ZNF677Q86XU0 584 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 HACE1Q8IYU2 909 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 BEST2Q8NFU1 509 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 TFAP2BQ92481 460 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 HPDLQ96IR7 371 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 NOX5Q96PH1 765 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 TWNKQ96RR1 684 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 TSPAN18Q96SJ8 248 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 GOLPH3Q9H4A6 298 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 GOLGA2P5Q9HBQ8 144 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 OSGEPQ9NPF4 335 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 PARP2Q9UGN5 583 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 TSC2P49815 1807 aa10.11□□□□□ -0.79
PDLIM5-223ENST00000627587 ANKRD62A6NC57 917 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 PIRO00625 290 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 CTIFO43310 598 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 XPOTO43592 962 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 RTN2O75298 545 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 PALMO75781 387 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 ABCB4P21439 1286 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 GNA15P30679 374 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 IRS1P35568 1242 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 RAD23BP54727 409 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 UBE3AQ05086 875 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 CLEC16AQ2KHT3 1053 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 ZNF394Q53GI3 561 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 C9orf57Q5W0N0 161 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 AGMOQ6ZNB7 445 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 EFHBQ8N7U6 833 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 SPPL3Q8TCT6 385 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 ZNF606Q8WXB4 792 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 CTNNBL1Q8WYA6 563 aaPredicted RBP10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 EDAQ92838 391 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 LPPQ93052 612 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 PPP1R10Q96QC0 940 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 TRAIPQ9BWF2 469 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 TLR10Q9BXR5 811 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 IGFLR1Q9H665 355 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 AAASQ9NRG9 546 aa10.1□□□□□ -0.79
PDLIM5-223ENST00000627587 UBQLN1Q9UMX0 589 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms