RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 NKX6-1P78426 367 aaPredicted RBP3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 SRSF4Q08170 494 aaKnown RBP3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 LLGL1Q15334 1064 aa3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 TBCCQ15814 346 aa3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 PTPROQ16827 1216 aa3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 BRDTQ58F21 947 aaPredicted RBP3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 CEP85Q6P2H3 762 aa3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 MVB12AQ96EY5 273 aa3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 ARHGEF3Q9NR81 526 aa3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 TYW1Q9NV66 732 aaKnown RBP3.97□□□□□ -1.77
PTP4A2-220ENST00000627328 E2F8A0AVK6 867 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 LINC01548A6NM66 108 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 TARM1B6A8C7 271 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 H3BUI4 141 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 SLC16A3O15427 465 aaKnown RBP3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 VPS4BO75351 444 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 CELA2AP08217 269 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 FAM163BP0C2L3 166 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 PHKA1P46020 1223 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 NEK2P51955 445 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 SATB1Q01826 763 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 IQCB1Q15051 598 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 LONRF3Q496Y0 759 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 CCDC157Q569K6 752 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 AARS2Q5JTZ9 985 aaKnown RBP3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 ATAT1Q5SQI0 421 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 LAYNQ6UX15 382 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 PPP1R3BQ86XI6 285 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 RASAL3Q86YV0 1011 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 C1GALT1C1Q96EU7 318 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 MAP3K14Q99558 947 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 PTDSS2Q9BVG9 487 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 C1QTNF7Q9BXJ2 289 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 SARS2Q9NP81 518 aaKnown RBP3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 HESX1Q9UBX0 185 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 ADAM21Q9UKJ8 722 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 ST3GAL5Q9UNP4 418 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 AGAP1Q9UPQ3 857 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 NOP58Q9Y2X3 529 aaKnown RBP3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 PLEKHM1Q9Y4G2 1056 aa3.96□□□□□ -1.78
PTP4A2-220ENST00000627328 DNAJC9-AS1A6NH13 148 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 MANSC4A6NHS7 340 aaPredicted RBP3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 M0QYG6 137 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 THP07101 528 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 HNRNPCP07910 306 aaKnown RBP eCLIP3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 EBLN1P0CF75 366 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 CYP2C9P11712 490 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 VIPR2P41587 438 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 ABCG1P45844 678 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 PXNP49023 591 aaPredicted RBP3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 GTF2H3Q13889 308 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 PLS1Q14651 629 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 EZH2Q15910 746 aaKnown RBP3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 TMEM108Q6UXF1 575 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 SLC29A4Q7RTT9 530 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 C1QL2Q7Z5L3 287 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 AMIGO2Q86SJ2 522 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 CAMKK1Q8N5S9 505 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 KLHDC4Q8TBB5 520 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 DPF1Q92782 380 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 HPS3Q969F9 1004 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 SLC35A4Q96G79 324 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 SLC29A3Q9BZD2 475 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 GTPBP4Q9BZE4 634 aaKnown RBP3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 PCDHA1Q9Y5I3 950 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 CNTNAP2Q9UHC6 1331 aa3.95□□□□□ -1.78
PTP4A2-220ENST00000627328 SETD1BQ9UPS6 1966 aaKnown RBP3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 COL3A1P02461 1466 aaPredicted RBP3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 PPM1DO15297 605 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 KCNAB3O43448 404 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 AHSGP02765 367 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 XRCC6P12956 609 aaKnown RBP eCLIP3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 CHRM3P20309 590 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 CERS1P27544 350 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 PCSK6P29122 969 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 GRM1Q13255 1194 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 SLC44A4Q53GD3 710 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 VPS53Q5VIR6 699 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 MTHFD1LQ6UB35 978 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 CATIPQ7Z7H3 387 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 FAM46DQ8NEK8 389 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 RP9Q8TA86 221 aaKnown RBP3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 FBXO41Q8TF61 875 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 SLC46A1Q96NT5 459 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 CNNM1Q9NRU3 951 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 MRPS18AQ9NVS2 196 aaKnown RBP3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 DKK3Q9UBP4 350 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 PNMA8BQ9ULN7 279 aaPredicted RBP3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 SHOC2Q9UQ13 582 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 STXBP5LQ9Y2K9 1186 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 MED16Q9Y2X0 877 aa3.94□□□□□ -1.78
PTP4A2-220ENST00000627328 QSOX1O00391 747 aa3.93□□□□□ -1.78
PTP4A2-220ENST00000627328 OFD1O75665 1012 aa3.93□□□□□ -1.78
PTP4A2-220ENST00000627328 DNAJB5O75953 348 aa3.93□□□□□ -1.78
PTP4A2-220ENST00000627328 IL6RP08887 468 aaPredicted RBP3.93□□□□□ -1.78
PTP4A2-220ENST00000627328 JUPP14923 745 aa3.93□□□□□ -1.78
PTP4A2-220ENST00000627328 LRPAP1P30533 357 aa3.93□□□□□ -1.78
PTP4A2-220ENST00000627328 KCNJ5P48544 419 aa3.93□□□□□ -1.78
PTP4A2-220ENST00000627328 WNT3P56703 355 aa3.93□□□□□ -1.78
PTP4A2-220ENST00000627328 SOX8P57073 446 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms