RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 KBTBD7Q8WVZ9 684 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 SLC35C1Q96A29 364 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 NECAB3Q96P71 396 aaPredicted RBP14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 GCNAQ96QF7 691 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 DUSP9Q99956 384 aaKnown RBP14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 RAB20Q9NX57 234 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 ABI2Q9NYB9 513 aaPredicted RBP14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 GDE1Q9NZC3 331 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 EPS15L1Q9UBC2 864 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 CDH7Q9ULB5 785 aa14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 MRPS23Q9Y3D9 190 aaKnown RBP14.96□□□□□ -0.01
SNRPA1-216ENST00000626000 BDP1A6H8Y1 2624 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 DCXO43602 365 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 RHOP08100 348 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 WEE2P0C1S8 567 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 HAPLN1P10915 354 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 GBP2P32456 591 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 EPHA5P54756 1037 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 SASS6Q6UVJ0 657 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 MTSS1LQ765P7 747 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 RNF135Q8IUD6 432 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 ATAD1Q8NBU5 361 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 MYCBPAPQ8TBZ2 947 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 GPT2Q8TD30 523 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 TAS1R2Q8TE23 839 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 PSMG2Q969U7 264 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 EEF2KMTQ96G04 330 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 FAM84AQ96KN4 292 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 SEPT5Q99719 369 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 SRRTQ9BXP5 876 aaKnown RBP14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 BCO2Q9BYV7 579 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 ELOVL4Q9GZR5 314 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 MAGEC2Q9UBF1 373 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 UXTQ9UBK9 157 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 SPTBN5Q9NRC6 3674 aaKnown RBP14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 VCANP13611 3396 aa14.95□□□□□ -0.02
SNRPA1-216ENST00000626000 SOBPA7XYQ1 873 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 C2CD4DB7Z1M9 353 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 CSH1P0DML2 217 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 CSH2P0DML3 217 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 TBXAS1P24557 533 aaPredicted RBP14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 STX17P56962 302 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 GET4Q7L5D6 327 aaPredicted RBP14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 TRIM59Q8IWR1 403 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 UBALD2Q8IYN6 164 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 B3GALNT2Q8NCR0 500 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 FAM200AQ8TCP9 573 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 FAM81BQ96LP2 452 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 TMEM209Q96SK2 561 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 PKMYT1Q99640 499 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 MRPL45Q9BRJ2 306 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 C1QTNF1Q9BXJ1 281 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 THAP9Q9H5L6 903 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 MMRN2Q9H8L6 949 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 ANO10Q9NW15 660 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 DNMT3BQ9UBC3 853 aaKnown RBP14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 GTF3C4Q9UKN8 822 aa14.94□□□□□ -0.02
SNRPA1-216ENST00000626000 TRIM66O15016 1216 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 LAMP2P13473 410 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 PTPN1P18031 435 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 ACAT1P24752 427 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 ANXA13P27216 316 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 CDC25CP30307 473 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 ASPAP45381 313 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 FMO5P49326 533 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 INCA1Q0VD86 236 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 MTMR3Q13615 1198 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 PTPN21Q16825 1174 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 DPCR1Q3MIW9 517 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 ARHGAP15Q53QZ3 475 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 LRRTM3Q86VH5 581 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 OSTM1Q86WC4 334 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 CORO1BQ9BR76 489 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 SORCS3Q9UPU3 1222 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 SLC27A5Q9Y2P5 690 aa14.93□□□□□ -0.02
SNRPA1-216ENST00000626000 PI4K2BG5E9Z4 385 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 LETM1O95202 739 aaPredicted RBP14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 VNN2O95498 520 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 AFPP02771 609 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 PDGFRBP09619 1106 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 CYP27A1Q02318 531 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 STX1AQ16623 288 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 DNAJB7Q7Z6W7 309 aaPredicted RBP14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 CRYBG2Q8N1P7 616 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 FGF13Q92913 245 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 MYLPFQ96A32 169 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 E2F7Q96AV8 911 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 TRMT2BQ96GJ1 504 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 PCED1BQ96HM7 432 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 SPATA17Q96L03 361 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 NT5C1AQ9BXI3 368 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 NAT10Q9H0A0 1025 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 SMYD3Q9H7B4 428 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 CEP72Q9P209 647 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 CDH22Q9UJ99 828 aa14.92□□□□□ -0.02
SNRPA1-216ENST00000626000 MYBPHLA2RUH7 354 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 GTPBP10A4D1E9 387 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 TPM2P07951 284 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 LMO2P25791 158 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms