RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TGFBR3LH3BV60 316 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 I3L4J1 428 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 SYN3O14994 580 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 POLR2DO15514 142 aaKnown RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 XYLBO75191 536 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 IL18RAPO95256 599 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 LDHAP00338 332 aaKnown RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 CYP3A5P20815 502 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 TKTP29401 623 aaKnown RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 GBP2P32456 591 aaPredicted RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 ELF1P32519 619 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 OR1D2P34982 312 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 BRCC3P46736 316 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 ACOT2P49753 483 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 ARPP19P56211 112 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 SOX4Q06945 474 aaPredicted RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 SPAG1Q07617 926 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 PKP1Q13835 747 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 TMEM132DQ14C87 1099 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 PPM1LQ5SGD2 360 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 SHC4Q6S5L8 630 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 DSTYKQ6XUX3 929 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 CCDC149Q6ZUS6 474 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 OTOP3Q7RTS5 596 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 USP37Q86T82 979 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 SMG7Q92540 1137 aaKnown RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 CALR3Q96L12 384 aaKnown RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 ZMAT2Q96NC0 199 aaKnown RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 FIZ1Q96SL8 496 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 CLSTN3Q9BQT9 956 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 HAPLN2Q9GZV7 340 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 SCAND2PQ9GZW5 306 aaPredicted RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 POMKQ9H5K3 350 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 MAGEF1Q9HAY2 307 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 OLFML3Q9NRN5 406 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 ZDHHC7Q9NXF8 308 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 MUTYHQ9UIF7 546 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 CPSF3Q9UKF6 684 aaKnown RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 RCOR1Q9UKL0 485 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 POLIQ9UNA4 740 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 DERAQ9Y315 318 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 R3HCC1Q9Y3T6 440 aaKnown RBP6.93□□□□□ -1.3
TCF4-249ENST00000625716 CDY1Q9Y6F8 540 aa6.93□□□□□ -1.3
TCF4-249ENST00000625716 TDRD15B5MCY1 1934 aaKnown RBP6.92□□□□□ -1.3
TCF4-249ENST00000625716 ATG2AQ2TAZ0 1938 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 A0A0A0MRY4 1105 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 FAM86C2PA6NEL3 165 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 C2CD4DB7Z1M9 353 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 LILRB5O75023 590 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 RFPL2O75678 378 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 PRPF6O94906 941 aaKnown RBP6.92□□□□□ -1.3
TCF4-249ENST00000625716 HNRNPA1P09651 372 aaKnown RBP eCLIP6.92□□□□□ -1.3
TCF4-249ENST00000625716 GARTP22102 1010 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 PAX3P23760 479 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 WEE1P30291 646 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 AFMP43652 599 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 POU5F1Q01860 360 aaKnown RBP6.92□□□□□ -1.3
TCF4-249ENST00000625716 CCINQ13939 588 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 RAB33AQ14088 237 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 ENOX2Q16206 610 aaKnown RBP6.92□□□□□ -1.3
TCF4-249ENST00000625716 UVSSAQ2YD98 709 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 CTXN3Q4LDR2 81 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 ZBTB41Q5SVQ8 909 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 AXDND1Q5T1B0 1012 aaPredicted RBP6.92□□□□□ -1.3
TCF4-249ENST00000625716 RESP18Q5W5W9 173 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 JADE1Q6IE81 842 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 ZNF280DQ6N043 979 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 ARMCX5Q6P1M9 558 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 SLC39A4Q6P5W5 647 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 LILRA6Q6PI73 481 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 RTL10Q7L3V2 364 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 METTL23Q86XA0 190 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 ZDHHC14Q8IZN3 488 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 C3orf58Q8NDZ4 430 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 CACTINQ8WUQ7 758 aaKnown RBP6.92□□□□□ -1.3
TCF4-249ENST00000625716 NUDT8Q8WV74 236 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 EDAQ92838 391 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 C7orf25Q9BPX7 421 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 FAM213AQ9BRX8 229 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 LRFN3Q9BTN0 628 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 ASB7Q9H672 318 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 KBTBD4Q9NVX7 518 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 ZFATQ9P243 1243 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 MTRRQ9UBK8 725 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 TUBGCP4Q9UGJ1 667 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 USP25Q9UHP3 1055 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 CDH22Q9UJ99 828 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 FBXW11Q9UKB1 542 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 KCNH3Q9ULD8 1083 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 USTQ9Y2C2 406 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 BACE2Q9Y5Z0 518 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 STYXL1Q9Y6J8 313 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 MYO7AQ13402 2215 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 EYSQ5T1H1 3165 aa6.92□□□□□ -1.3
TCF4-249ENST00000625716 UNC80Q8N2C7 3258 aa6.91□□□□□ -1.3
TCF4-249ENST00000625716 PVALEFA0A1B0GWK0 134 aa6.91□□□□□ -1.3
TCF4-249ENST00000625716 FRMD3A2A2Y4 597 aa6.91□□□□□ -1.3
TCF4-249ENST00000625716 GOLGA6L4A6NEF3 574 aa6.91□□□□□ -1.3
TCF4-249ENST00000625716 PRR33A8MZF0 331 aa6.91□□□□□ -1.3
TCF4-249ENST00000625716 TISP43B9A030 160 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms