RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 SEPT5Q99719 369 aaPredicted RBP15.12■□□□□ 0.01
SNX1-214ENST00000625244 ACO2Q99798 780 aaKnown RBP15.12■□□□□ 0.01
SNX1-214ENST00000625244 KIF9Q9HAQ2 790 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 DUS2Q9NX74 493 aaKnown RBP15.12■□□□□ 0.01
SNX1-214ENST00000625244 DAXXQ9UER7 740 aaPredicted RBP15.12■□□□□ 0.01
SNX1-214ENST00000625244 PCDHA12Q9UN75 941 aa15.12■□□□□ 0.01
SNX1-214ENST00000625244 DEXIO95424 95 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 SPATA31C1P0DKV0 1188 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 HSPA4P34932 840 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 SLC14A1Q13336 389 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 NBR1Q14596 966 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 MTF1Q14872 753 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 VEPH1Q14D04 833 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 LMBRD2Q68DH5 695 aaPredicted RBP15.11■□□□□ 0.01
SNX1-214ENST00000625244 NAXDQ8IW45 347 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 CCDC26Q8TAB7 109 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 PIP4K2CQ8TBX8 421 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 OXER1Q8TDS5 423 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 NAP1L4Q99733 375 aaKnown RBP15.11■□□□□ 0.01
SNX1-214ENST00000625244 HSFX1Q9UBD0 423 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 ZMYM5Q9UJ78 669 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 APOBEC2Q9Y235 224 aaKnown RBP15.11■□□□□ 0.01
SNX1-214ENST00000625244 WNT6Q9Y6F9 365 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 PTPRBP23467 1997 aa15.11■□□□□ 0.01
SNX1-214ENST00000625244 FAM205CA6NFA0 338 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 J3QKU1 62 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 F11P03951 625 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 CYP11B2P19099 503 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 TUFMP49411 452 aaKnown RBP15.1■□□□□ 0.01
SNX1-214ENST00000625244 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
SNX1-214ENST00000625244 NLRP12P59046 1061 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 PPP2R5AQ15172 486 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 EML3Q32P44 896 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 MGAT5BQ3V5L5 792 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 OVOS1Q6IE37 1185 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 PADI6Q6TGC4 694 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 TMPRSS7Q7RTY8 843 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 FBXL16Q8N461 479 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 OR10T2Q8NGX3 314 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 OSCP1Q8WVF1 389 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 ATP2A3Q93084 1043 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 AGXT2Q9BYV1 514 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 TTC12Q9H892 705 aaPredicted RBP15.1■□□□□ 0.01
SNX1-214ENST00000625244 PPP4R2Q9NY27 417 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 PTPRQQ9UMZ3 2332 aa15.1■□□□□ 0.01
SNX1-214ENST00000625244 TRABD2BA6NFA1 517 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 K7ERI5 159 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 ABLIM1O14639 778 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 CBFA2T3O75081 653 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 DDX6P26196 483 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNX1-214ENST00000625244 OPRD1P41143 372 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 ABCG1P45844 678 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 ZNF268Q14587 947 aaPredicted RBP15.09■□□□□ 0.01
SNX1-214ENST00000625244 TAF12Q16514 161 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 SLC10A6Q3KNW5 377 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 ARMCX5Q6P1M9 558 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 GLRX5Q86SX6 157 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 SFTPA1Q8IWL2 248 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 ALLCQ8N6M5 410 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 TTC16Q8NEE8 873 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 JAKMIP1Q96N16 626 aaKnown RBP15.09■□□□□ 0.01
SNX1-214ENST00000625244 DCBLD2Q96PD2 775 aa15.09■□□□□ 0.01
SNX1-214ENST00000625244 BCCIPQ9P287 314 aaKnown RBP eCLIP15.09■□□□□ 0.01
SNX1-214ENST00000625244 SGK1O00141 431 aa15.08■□□□□ 0
SNX1-214ENST00000625244 AP5Z1O43299 807 aa15.08■□□□□ 0
SNX1-214ENST00000625244 SYPP08247 313 aa15.08■□□□□ 0
SNX1-214ENST00000625244 MCF2P10911 925 aa15.08■□□□□ 0
SNX1-214ENST00000625244 CHRM1P11229 460 aaPredicted RBP15.08■□□□□ 0
SNX1-214ENST00000625244 HARSP12081 509 aaKnown RBP15.08■□□□□ 0
SNX1-214ENST00000625244 HMGA1P17096 107 aaKnown RBP15.08■□□□□ 0
SNX1-214ENST00000625244 ITPKBP27987 946 aa15.08■□□□□ 0
SNX1-214ENST00000625244 LRPAP1P30533 357 aa15.08■□□□□ 0
SNX1-214ENST00000625244 TXKP42681 527 aa15.08■□□□□ 0
SNX1-214ENST00000625244 IFNAR2P48551 515 aa15.08■□□□□ 0
SNX1-214ENST00000625244 RPL6Q02878 288 aaKnown RBP15.08■□□□□ 0
SNX1-214ENST00000625244 SPAG1Q07617 926 aa15.08■□□□□ 0
SNX1-214ENST00000625244 ZNF77Q15935 545 aa15.08■□□□□ 0
SNX1-214ENST00000625244 SLC39A12Q504Y0 691 aa15.08■□□□□ 0
SNX1-214ENST00000625244 SEZ6Q53EL9 994 aa15.08■□□□□ 0
SNX1-214ENST00000625244 DSTYKQ6XUX3 929 aa15.08■□□□□ 0
SNX1-214ENST00000625244 MON1AQ86VX9 555 aa15.08■□□□□ 0
SNX1-214ENST00000625244 CATSPER3Q86XQ3 398 aa15.08■□□□□ 0
SNX1-214ENST00000625244 EFCAB13Q8IY85 973 aa15.08■□□□□ 0
SNX1-214ENST00000625244 FAM177A1Q8N128 213 aaPredicted RBP15.08■□□□□ 0
SNX1-214ENST00000625244 TXNDC5Q8NBS9 432 aaKnown RBP15.08■□□□□ 0
SNX1-214ENST00000625244 HMGB4Q8WW32 186 aa15.08■□□□□ 0
SNX1-214ENST00000625244 IFT74Q96LB3 600 aa15.08■□□□□ 0
SNX1-214ENST00000625244 TARS2Q9BW92 718 aaKnown RBP15.08■□□□□ 0
SNX1-214ENST00000625244 LINC00597Q9H2U6 94 aa15.08■□□□□ 0
SNX1-214ENST00000625244 PRORYQ9H606 182 aa15.08■□□□□ 0
SNX1-214ENST00000625244 GJB4Q9NTQ9 266 aa15.08■□□□□ 0
SNX1-214ENST00000625244 KIAA1522Q9P206 1035 aaPredicted RBP15.08■□□□□ 0
SNX1-214ENST00000625244 PTPN13Q12923 2485 aa15.07■□□□□ 0
SNX1-214ENST00000625244 MED24O75448 989 aa15.07■□□□□ 0
SNX1-214ENST00000625244 KLF8O95600 359 aaPredicted RBP15.07■□□□□ 0
SNX1-214ENST00000625244 TYMPP19971 482 aa15.07■□□□□ 0
SNX1-214ENST00000625244 PROZP22891 400 aa15.07■□□□□ 0
SNX1-214ENST00000625244 EVCP57679 992 aa15.07■□□□□ 0
SNX1-214ENST00000625244 MRPS21P82921 87 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms