RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 VARS2Q5ST30 1063 aaKnown RBP18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 KIAA0319Q5VV43 1072 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 TRIM72Q6ZMU5 477 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 ACBD6Q9BR61 282 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 KCND1Q9NSA2 647 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 NENFQ9UMX5 172 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 PCDHGC3Q9UN70 934 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 PCDHA13Q9Y5I0 950 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 OAZ2O95190 189 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 CCDC130P13994 396 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 MAGEA1P43355 309 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 STILQ15468 1287 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 CLEC16AQ2KHT3 1053 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 GOLGA7BQ2TAP0 167 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 MDH1BQ5I0G3 518 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 PPP1R26Q5T8A7 1209 aaPredicted RBP18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 TAS1R1Q7RTX1 841 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 KIAA1328Q86T90 577 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 OR10T2Q8NGX3 314 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 CLP1Q92989 425 aaKnown RBP18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 CYFIP2Q96F07 1278 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 GDF15Q99988 308 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 TTPALQ9BTX7 342 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 VN1R3Q9BXE9 311 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 LUC7LQ9NQ29 371 aaKnown RBP18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 CRTAC1Q9NQ79 661 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 TAS2R14Q9NYV8 317 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 CEP83Q9Y592 693 aa18.91■□□□□ 0.62
PTCHD3-202ENST00000622555 GRXCR1A8MXD5 290 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 M0QYV0 167 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 ZSCAN12O43309 604 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 MICAL2O94851 1124 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 EFEMP2O95967 443 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 CYP1A1P04798 512 aaPredicted RBP18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 LINC00271P0C7V0 271 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 TSPY1Q01534 308 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 CCDC142Q17RM4 750 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 USP41Q3LFD5 358 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 INTS6LQ5JSJ4 861 aaKnown RBP18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 RTP2Q5QGT7 225 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 NAA35Q5VZE5 725 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 ARHGAP17Q68EM7 881 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 FAM109BQ6ICB4 259 aaPredicted RBP18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 DENND1BQ6P3S1 775 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 LCLAT1Q6UWP7 414 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 DNAAF5Q86Y56 855 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 TRMT1Q9NXH9 659 aaKnown RBP18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 TSPAN16Q9UKR8 245 aa18.9■□□□□ 0.62
PTCHD3-202ENST00000622555 LSM8O95777 96 aaKnown RBP18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 GZMAP12544 262 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 ADORA2BP29275 332 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 CTXN3Q4LDR2 81 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 C10orf76Q5T2E6 689 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 ZNF280DQ6N043 979 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 CCAR2Q8N163 923 aaKnown RBP18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 SLC2A14Q8TDB8 520 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 CPA5Q8WXQ8 436 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 TMEM209Q96SK2 561 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 HESX1Q9UBX0 185 aa18.89■□□□□ 0.61
PTCHD3-202ENST00000622555 MYBPHLA2RUH7 354 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 H7C4K7 107 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 RTN2O75298 545 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 SOD2P04179 222 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 UNGP13051 313 aaPredicted RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 MYOGP15173 224 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 CDR1P51861 262 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 VAV2P52735 878 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 NOMO3P69849 1222 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 MRPL58Q14197 206 aaKnown RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 KIAA1841Q6NSI8 718 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 ANKS3Q6ZW76 656 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 DDX53Q86TM3 631 aaKnown RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 RNF168Q8IYW5 571 aaPredicted RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 TMEM35BQ8NCS4 154 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 C1orf131Q8NDD1 294 aaKnown RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 UBA3Q8TBC4 463 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 MYCBPAPQ8TBZ2 947 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 MED10Q9BTT4 135 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 LHX5Q9H2C1 402 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 GTF3C4Q9UKN8 822 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 PLXNA4Q9HCM2 1894 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 USP27XA6NNY8 438 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 CCP110O43303 1012 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 FGF18O76093 207 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 FTLP02792 175 aaPredicted RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 H2AFZP0C0S5 128 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 NSFP46459 744 aaKnown RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 KRT17Q04695 432 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 ACAD10Q6JQN1 1059 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 H2AFVQ71UI9 128 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 RIN2Q8WYP3 895 aaPredicted RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 HNRNPABQ99729 332 aaKnown RBP18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 HERC2P3Q9BVR0 1158 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 PACSIN1Q9BY11 444 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 TFR2Q9UP52 801 aa18.88■□□□□ 0.61
PTCHD3-202ENST00000622555 A0A0U1RQJ8 604 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 LINC01553A4QN01 128 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 OR6C75A6NL08 312 aa18.87■□□□□ 0.61
PTCHD3-202ENST00000622555 CDH5P33151 784 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms