RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SPARCL1Q14515 664 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 NR1D2Q14995 579 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 PDK4Q16654 411 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 LONRF1Q17RB8 773 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 TRIM71Q2Q1W2 868 aaKnown RBP7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 MYLK3Q32MK0 819 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 CYFIP1Q7L576 1253 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 DHDDSQ86SQ9 333 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 ZNF410Q86VK4 478 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 ZFPM1Q8IX07 1006 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SCYL3Q8IZE3 742 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 CACTIN-AS1Q8N1I8 211 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 METTL25Q8N6Q8 603 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 CCDC110Q8TBZ0 833 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 REEP2Q9BRK0 252 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SLC39A3Q9BRY0 314 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 ANO3Q9BYT9 981 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 Q9H521 79 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 MLXIPLQ9NP71 852 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 VTA1Q9NP79 307 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 MTUS1Q9ULD2 1270 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 RABGAP1Q9Y3P9 1069 aa7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.87□□□□□ -1.15
TRIM49B-202ENST00000622138 LRRC37AA6NMS7 1700 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 QSER1Q2KHR3 1735 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 ASTN1O14525 1302 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 KMOO15229 486 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 PEX1O43933 1283 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CSDE1O75534 798 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 AKAP3O75969 853 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 TNFAIP8O95379 198 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 SPATA31C1P0DKV0 1188 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 NAT2P11245 290 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 UCHL3P15374 230 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CREB1P16220 341 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 VCLP18206 1134 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 AMPD1P23109 780 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 PON1P27169 355 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CHRNA3P32297 505 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 PGM1P36871 562 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CASP4P49662 377 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 NR1H2P55055 460 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 KCNA1Q09470 495 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 NFIAQ12857 509 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 NR1H3Q13133 447 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 MMEL1Q495T6 779 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 TRAPPC3LQ5T215 181 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 SPOPLQ6IQ16 392 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 SLC30A10Q6XR72 485 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 DCDC5Q6ZRR9 648 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 RAPH1Q70E73 1250 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 EPM2AIP1Q7L775 607 aaPredicted RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 KRT27Q7Z3Y8 459 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 VPS36Q86VN1 386 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CATSPER3Q86XQ3 398 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 LZTR1Q8N653 840 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 ETNPPLQ8TBG4 499 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CERKQ8TCT0 537 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 FAM172AQ8WUF8 416 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 OTUD5Q96G74 571 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 FAM161BQ96MY7 647 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 TTC25Q96NG3 672 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 PRPF18Q99633 342 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 RUSC1Q9BVN2 902 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 OSBPL8Q9BZF1 889 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 LRRC4BQ9NT99 713 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 RSL24D1Q9UHA3 163 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 SERPINB13Q9UIV8 391 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 SATB2Q9UPW6 733 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 SNX24Q9Y343 169 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 PCDHAC2Q9Y5I4 1007 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 C6orf229H3BNL8 230 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 PFDN6O15212 129 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 PRPF4O43172 522 aaKnown RBP eCLIP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 DENRO43583 198 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CDH16O75309 829 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 STAM2O75886 525 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 FGGP02679 453 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 KRT18P05783 430 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 RARBP10826 455 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 ALAS1P13196 640 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CDH2P19022 906 aaPredicted RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 EPS15P42566 896 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 PTGIRP43119 386 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 GSSP48637 474 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CDK9P50750 372 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 DNAJC3Q13217 504 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 E2F2Q14209 437 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 SUZ12Q15022 739 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 EPHA7Q15375 998 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CYTH1Q15438 398 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 EDRF1Q3B7T1 1238 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 DCAF17Q5H9S7 520 aaPredicted RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 KYAT3Q6YP21 454 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 NT5DC3Q86UY8 548 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 SLC43A3Q8NBI5 491 aa7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 U2AF1L4Q8WU68 220 aaKnown RBP7.86□□□□□ -1.15
TRIM49B-202ENST00000622138 CHPT1Q8WUD6 406 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms