RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 NDST1P52848 882 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 IFT88Q13099 833 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 ZNF177Q13360 481 aaPredicted RBP9.67□□□□□ -0.86
GGA3-223ENST00000621870 FASTKD1Q53R41 847 aaKnown RBP9.67□□□□□ -0.86
GGA3-223ENST00000621870 ACAD10Q6JQN1 1059 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 EXOC4Q96A65 974 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 GPATCH2LQ9NWQ4 482 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 GTSE1Q9NYZ3 720 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 UBIAD1Q9Y5Z9 338 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 A0A087X0B3 334 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 LACTBL1A8MY62 500 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 EPHB3P54753 998 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 BYSLQ13895 437 aaKnown RBP9.67□□□□□ -0.86
GGA3-223ENST00000621870 PDK1Q15118 436 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 BTNL9Q6UXG8 535 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.67□□□□□ -0.86
GGA3-223ENST00000621870 ZNF410Q86VK4 478 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 ATP6V0D2Q8N8Y2 350 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 CCDC197Q8NCU1 140 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 TMEM176AQ96HP8 235 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 TRIM51Q9BSJ1 452 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 TRIM54Q9BYV2 358 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 RNPEPQ9H4A4 650 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 IGFLR1Q9H665 355 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 DOLKQ9UPQ8 538 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 FRMPD4Q14CM0 1322 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 CFLARO15519 480 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SLC2A3P11169 496 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 TKTL1P51854 596 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 KLHL38Q2WGJ6 581 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 FAXCQ5TGI0 409 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 ALS2CLQ60I27 953 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SH3BP5LQ7L8J4 393 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SNF8Q96H20 258 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 LRRC1Q9BTT6 524 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 GPR63Q9BZJ6 419 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 VCXQ9H320 206 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 DSEQ9UL01 958 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 PPME1Q9Y570 386 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 MRC1P22897 1456 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SMIM10L2AP0DMW4 78 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SMIM10L2BP0DMW5 78 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 BRAFP15056 766 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 MLH1P40692 756 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 PMS2P54278 862 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SATB1Q01826 763 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 P3H1Q32P28 736 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SLC47A2Q86VL8 602 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 WDR75Q8IWA0 830 aaKnown RBP9.66□□□□□ -0.86
GGA3-223ENST00000621870 ARHGAP18Q8N392 663 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 IFT172Q9UG01 1749 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 CNTNAP2Q9UHC6 1331 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 ASS1P00966 412 aaKnown RBP9.66□□□□□ -0.86
GGA3-223ENST00000621870 CCZ1BP86790 482 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 CCZ1P86791 482 aaPredicted RBP9.66□□□□□ -0.86
GGA3-223ENST00000621870 TBC1D1Q86TI0 1168 aaPredicted RBP9.66□□□□□ -0.86
GGA3-223ENST00000621870 BRSK2Q8IWQ3 736 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 ELOA2Q8IYF1 753 aaPredicted RBP9.66□□□□□ -0.86
GGA3-223ENST00000621870 GLIS3Q8NEA6 775 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 MTMR9Q96QG7 549 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 CYP3A43Q9HB55 503 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 NUDT5Q9UKK9 219 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 NFASCO94856 1347 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 A0A0G2JND7 137 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 ANKRD63C9JTQ0 380 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 GOLGA8RI6L899 631 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 ESRRBO95718 433 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 GLRA2P23416 452 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 CD52P31358 61 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SESN3P58005 492 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 COPS2P61201 443 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 IL1RL1Q01638 556 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 DHX34Q14147 1143 aaKnown RBP9.66□□□□□ -0.86
GGA3-223ENST00000621870 SPARCL1Q14515 664 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 NBPF20Q3BBV1 942 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 PALB2Q86YC2 1186 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 ZNF507Q8TCN5 953 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 FAM172AQ8WUF8 416 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SLC20A1Q8WUM9 679 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 ZNF606Q8WXB4 792 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 PPWD1Q96BP3 646 aaKnown RBP9.66□□□□□ -0.86
GGA3-223ENST00000621870 ARHGEF26Q96DR7 871 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 RBM15Q96T37 977 aaKnown RBP eCLIP9.66□□□□□ -0.86
GGA3-223ENST00000621870 TSPAN16Q9UKR8 245 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 SLC4A7Q9Y6M7 1214 aa9.66□□□□□ -0.86
GGA3-223ENST00000621870 KPNA7A9QM74 516 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 F5H5T6 163 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 PIK3CDO00329 1044 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 NDUFS3O75489 264 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 F9P00740 461 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 AMHP03971 560 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 TTC31Q49AM3 519 aaPredicted RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 TMEM119Q4V9L6 283 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 CCDC38Q502W7 563 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 AGR3Q8TD06 166 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 RXFP2Q8WXD0 754 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 SENP8Q96LD8 212 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 RAB3IPQ96QF0 476 aaPredicted RBP9.65□□□□□ -0.86
GGA3-223ENST00000621870 KCNF1Q9H3M0 494 aa9.65□□□□□ -0.86
GGA3-223ENST00000621870 KCNMB3Q9NPA1 279 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms