RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 HCRTO43612 131 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 RARAP10276 462 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 RALAP11233 206 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 TCF4P15884 667 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 PTP4A2Q12974 167 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 TRIP13Q15645 432 aaPredicted RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 SMTNL2Q2TAL5 461 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 FAM102AQ5T9C2 384 aaPredicted RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 OR6B2Q6IFH4 312 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 PRELID2Q8N945 189 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 WHAMMQ8TF30 809 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 UBLCP1Q8WVY7 318 aaPredicted RBP10.5□□□□□ -0.73
VTA1-205ENST00000620996 RUBCNQ92622 972 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 HAUS1Q96CS2 278 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 ZFP42Q96MM3 310 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CPXM1Q96SM3 734 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CYP3A43Q9HB55 503 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 CACNG4Q9UBN1 327 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 TSPAN16Q9UKR8 245 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 Q9Y3F1 56 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 SH3BP1Q9Y3L3 701 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 IPPQ9Y573 584 aa10.5□□□□□ -0.73
VTA1-205ENST00000620996 ALDH1A1P00352 501 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 ASGR1P07306 291 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 PAEPP09466 180 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 ADORA2BP29275 332 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 CETN2P41208 172 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 MRPS6P82932 125 aaKnown RBP10.49□□□□□ -0.73
VTA1-205ENST00000620996 SP3Q02447 781 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 CFAP58Q5T655 872 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 TAF2Q6P1X5 1199 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 FAM228AQ86W67 206 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 JAMLQ86YT9 394 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 CAPNS2Q96L46 248 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 PCSK1NQ9UHG2 260 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 CYTH4Q9UIA0 394 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 STRIP2Q9ULQ0 834 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 TTC7AQ9ULT0 858 aaPredicted RBP10.49□□□□□ -0.73
VTA1-205ENST00000620996 UBQLN1Q9UMX0 589 aaKnown RBP10.49□□□□□ -0.73
VTA1-205ENST00000620996 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.49□□□□□ -0.73
VTA1-205ENST00000620996 SMIM28A0A1B0GU29 152 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 SEPT4O43236 478 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 ERBB2P04626 1255 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 VDRP11473 427 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 HSPA6P17066 643 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 PLTPP55058 493 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 KCNA10Q16322 511 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 CDO1Q16878 200 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 JOSD2Q8TAC2 188 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 LPPQ93052 612 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 ZNF518BQ9C0D4 1074 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 SNX25Q9H3E2 840 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 PLEKHA5Q9HAU0 1116 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 FAM53CQ9NYF3 392 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 PCDHGC3Q9UN70 934 aa10.49□□□□□ -0.73
VTA1-205ENST00000620996 TRIP12Q14669 1992 aaPredicted RBP10.49□□□□□ -0.73
VTA1-205ENST00000620996 LRRD1A4D1F6 860 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 KRT10P13645 584 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 AXLP30530 894 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 CHRNA3P32297 505 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 RFC1P35251 1148 aaPredicted RBP10.48□□□□□ -0.73
VTA1-205ENST00000620996 DYNLT1P63172 113 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 NOGQ13253 232 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 CUL1Q13616 776 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 C9orf57Q5W0N0 161 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 TTC27Q6P3X3 843 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 NT5DC4Q86YG4 428 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 WNT8BQ93098 351 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 PLCD4Q9BRC7 762 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 NEUROG2Q9H2A3 272 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 RNF186Q9NXI6 227 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 HESX1Q9UBX0 185 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 ASIC3Q9UHC3 531 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 ST3GAL5Q9UNP4 418 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 TRPV2Q9Y5S1 764 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 TMEM191CA6NGB0 347 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 XPOTO43592 962 aaKnown RBP10.48□□□□□ -0.73
VTA1-205ENST00000620996 GJA9P57773 515 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 ADAM17P78536 824 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 OGDHQ02218 1023 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 PPARDQ03181 441 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 PDCLQ13371 301 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 PPP2R5EQ16537 467 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 DEFB115Q30KQ5 88 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 KCNT1Q5JUK3 1230 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 FBXO47Q5MNV8 452 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 GSTA5Q7RTV2 222 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 CCDC25Q86WR0 208 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 ZDHHC14Q8IZN3 488 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 NME8Q8N427 588 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 CXorf38Q8TB03 319 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 RAET1EQ8TD07 263 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 MIS12Q9H081 205 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 DPEP3Q9H4B8 488 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 GTF2IRD1Q9UHL9 959 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.48□□□□□ -0.73
VTA1-205ENST00000620996 ZSWIM8A7E2V4 1837 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 ZNF236Q9UL36 1845 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 MEIS3P2A8K0S8 358 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms