RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 PAK5Q9P286 719 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ZNRF3Q9ULT6 936 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 SLC4A7Q9Y6M7 1214 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 O00370 1275 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ATP9BO43861 1147 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 RPS6KA5O75582 802 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 UBOX5O94941 541 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 PYGMP11217 842 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 RRM1P23921 792 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 IFI35P80217 286 aaPredicted RBP8.72□□□□□ -1.01
ALMS1-208ENST00000620466 CBWD6Q4V339 395 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 CBWD3Q5JTY5 395 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 CBWD5Q5RIA9 395 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 CD302Q8IX05 232 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 FBXO36Q8NEA4 188 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 GPRASP2Q96D09 838 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 EGFL8Q99944 293 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 RSAD1Q9HA92 442 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ADA2Q9NZK5 511 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 E2F8A0AVK6 867 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 DNAJC6O75061 913 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 TMEM132DQ14C87 1099 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 CHI3L2Q15782 390 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ATF7IP2Q5U623 682 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ITPRIPL1Q6GPH6 555 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 PID1Q7Z2X4 250 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 PRPF39Q86UA1 669 aaKnown RBP8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ZNF280CQ8ND82 737 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ARMC2Q8NEN0 867 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ASIC4Q96FT7 647 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 PRMT6Q96LA8 375 aaPredicted RBP8.72□□□□□ -1.01
ALMS1-208ENST00000620466 DCLK3Q9C098 648 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ZFATQ9P243 1243 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ZBTB39O15060 712 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 SERPINB9P50453 376 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 DEUP1Q05D60 604 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ITGB3BPQ13352 177 aaPredicted RBP8.72□□□□□ -1.01
ALMS1-208ENST00000620466 GOLGA7BQ2TAP0 167 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 OTOP1Q7RTM1 612 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 HAS1Q92839 578 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 NRBF2Q96F24 287 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 VPS39Q96JC1 886 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 OLFM3Q96PB7 478 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 TEX13BQ9BXU2 312 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 ELP3Q9H9T3 547 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 C17orf75Q9HAS0 396 aa8.72□□□□□ -1.01
ALMS1-208ENST00000620466 EML1O00423 815 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 IL18RAPO95256 599 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 SNRPAP09012 282 aaKnown RBP8.71□□□□□ -1.01
ALMS1-208ENST00000620466 VIL1P09327 827 aaKnown RBP8.71□□□□□ -1.01
ALMS1-208ENST00000620466 IRF1P10914 325 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 CPA2P48052 419 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 VCPP55072 806 aaKnown RBP8.71□□□□□ -1.01
ALMS1-208ENST00000620466 ACTR2P61160 394 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 POU5F1BQ06416 359 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 PCNX4Q63HM2 1172 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 ANO5Q75V66 913 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 LRRC71Q8N4P6 559 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 ZC3H15Q8WU90 426 aaKnown RBP8.71□□□□□ -1.01
ALMS1-208ENST00000620466 SLC5A5Q92911 643 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 TATDN2Q93075 761 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 ATG4CQ96DT6 458 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 THTPAQ9BU02 230 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 MAGEB5Q9BZ81 275 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 SPAG6O75602 509 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 ECM1Q16610 540 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 SPOCD1Q6ZMY3 1216 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 SPATA2LQ8IUW3 424 aaPredicted RBP8.71□□□□□ -1.01
ALMS1-208ENST00000620466 LNX1Q8TBB1 728 aaPredicted RBP8.71□□□□□ -1.01
ALMS1-208ENST00000620466 TMC2Q8TDI7 906 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 ULK4Q96C45 1275 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 DDX50Q9BQ39 737 aaKnown RBP8.71□□□□□ -1.01
ALMS1-208ENST00000620466 BFARQ9NZS9 450 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 LMO7Q8WWI1 1683 aa8.71□□□□□ -1.01
ALMS1-208ENST00000620466 RGPD8O14715 1765 aaPredicted RBP8.71□□□□□ -1.02
ALMS1-208ENST00000620466 UBA6A0AVT1 1052 aaPredicted RBP8.71□□□□□ -1.02
ALMS1-208ENST00000620466 BTNL10A8MVZ5 291 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 B2RBV5 119 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 KBTBD13C9JR72 458 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 SMAPO00193 183 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 TRAPPC3O43617 180 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 PROSCO94903 275 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 FGRP09769 529 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 KCNA3P22001 575 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 SOX10P56693 466 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 ORC1Q13415 861 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 EFTUD2Q15029 972 aaKnown RBP eCLIP8.71□□□□□ -1.02
ALMS1-208ENST00000620466 MICALL2Q8IY33 904 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 RAB42Q8N4Z0 105 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 DNAJC19Q96DA6 116 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 CACNA1FO60840 1977 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 MAFGO15525 162 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 ZC3H11AO75152 810 aaKnown RBP eCLIP8.71□□□□□ -1.02
ALMS1-208ENST00000620466 E2F6O75461 281 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 OCM2P0CE71 109 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 OCMP0CE72 109 aaPredicted RBP8.71□□□□□ -1.02
ALMS1-208ENST00000620466 RBP5P82980 135 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 DYNC1I2Q13409 638 aaKnown RBP8.71□□□□□ -1.02
ALMS1-208ENST00000620466 COBLL1Q53SF7 1204 aa8.71□□□□□ -1.02
ALMS1-208ENST00000620466 E2F7Q96AV8 911 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms