RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 SLFN12LQ6IEE8 588 aa5.89□□□□□ -1.47
CBWD3-215ENST00000619322 MPZL3Q6UWV2 235 aa5.89□□□□□ -1.47
CBWD3-215ENST00000619322 EPM2AIP1Q7L775 607 aaPredicted RBP5.89□□□□□ -1.47
CBWD3-215ENST00000619322 ITIH5Q86UX2 942 aa5.89□□□□□ -1.47
CBWD3-215ENST00000619322 SLC44A3Q8N4M1 653 aa5.89□□□□□ -1.47
CBWD3-215ENST00000619322 SPPL2BQ8TCT7 592 aa5.89□□□□□ -1.47
CBWD3-215ENST00000619322 SLC7A3Q8WY07 619 aa5.89□□□□□ -1.47
CBWD3-215ENST00000619322 TTPALQ9BTX7 342 aa5.89□□□□□ -1.47
CBWD3-215ENST00000619322 HOMER2Q9NSB8 354 aa5.89□□□□□ -1.47
CBWD3-215ENST00000619322 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.88□□□□□ -1.47
CBWD3-215ENST00000619322 ALDH2P05091 517 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 FDPSP14324 419 aaKnown RBP5.88□□□□□ -1.47
CBWD3-215ENST00000619322 DRD1P21728 446 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 MARCKSP29966 332 aaPredicted RBP5.88□□□□□ -1.47
CBWD3-215ENST00000619322 CDC25CP30307 473 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 UBE2HP62256 183 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 PLAURQ03405 335 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 CCINQ13939 588 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 USP17L6PQ6QN14 398 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 C8orf86Q6ZUL3 223 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 DEFB128Q7Z7B8 93 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 ZBTB8OSQ8IWT0 167 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 PDCL2Q8N4E4 241 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 ZNF461Q8TAF7 563 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 GAB3Q8WWW8 586 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 NANOS1Q8WY41 292 aaKnown RBP5.88□□□□□ -1.47
CBWD3-215ENST00000619322 IRF7Q92985 503 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 ASB16Q96NS5 453 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 CLSTN3Q9BQT9 956 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 RAB34Q9BZG1 259 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 PCDHGC5Q9Y5F6 944 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 TBKBP1A7MCY6 615 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 SHISA8B8ZZ34 492 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 LINC01565O15544 149 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 CBFA2T3O75081 653 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 TECP42680 631 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 IDH3AP50213 366 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 RAD51AP2Q09MP3 1159 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 C1orf210Q8IVY1 113 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 JAKMIP2Q96AA8 810 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 OSBPL7Q9BZF2 842 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 INCENPQ9NQS7 918 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 CLDND1Q9NY35 253 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 GCNT4Q9P109 453 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 ADAMTS20P59510 1910 aa5.88□□□□□ -1.47
CBWD3-215ENST00000619322 ATXN7O15265 892 aaPredicted RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 ZNF500O60304 480 aaPredicted RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 VNN2O95498 520 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 C1SP09871 688 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 GOLGA8HP0CJ92 632 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 PTPN2P17706 415 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 GTF2H1P32780 548 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 NRIP1P48552 1158 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 DLX2Q07687 328 aaPredicted RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 SCRN1Q12765 414 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 UTP14CQ5TAP6 766 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 C16orf46Q6P387 395 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 LYPD4Q6UWN0 246 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 PDZD8Q8NEN9 1154 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 GPR152Q8TDT2 470 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 ACDQ96AP0 544 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 TMEM169Q96HH4 297 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 CDK5RAP1Q96SZ6 601 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 EIF2AK1Q9BQI3 630 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 IGFLR1Q9H665 355 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 ARHGEF3Q9NR81 526 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 TOPORSQ9NS56 1045 aaPredicted RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 RSPH14Q9UHP6 348 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 CPSF3Q9UKF6 684 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 ITGA11Q9UKX5 1188 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 NOL7Q9UMY1 257 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 ZNF510Q9Y2H8 683 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 KIF3AQ9Y496 699 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 KLF18A0A0U1RQI7 1052 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 DFNA5O60443 496 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 CLTAP09496 248 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 FGFR1P11362 822 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 PLS3P13797 630 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 RESTQ13127 1097 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 RILPL1Q5EBL4 403 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 WDR44Q5JSH3 913 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 NT5DC1Q5TFE4 455 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 KRT40Q6A162 431 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 C10orf67Q8IYJ2 551 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 TBCKQ8TEA7 893 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 ASB12Q8WXK4 309 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 NKD2Q969F2 451 aaPredicted RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 MRPL4Q9BYD3 311 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 SLC2A11Q9BYW1 496 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 CSNK1G1Q9HCP0 422 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 NAGPAQ9UK23 515 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 UBQLN1Q9UMX0 589 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 ARHGAP26Q9UNA1 814 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 DDHD2O94830 711 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 LDHAP00338 332 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 PROS1P07225 676 aa5.87□□□□□ -1.47
CBWD3-215ENST00000619322 CNPP09543 421 aaKnown RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 MYCLP12524 364 aaPredicted RBP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 GTF2F1P35269 517 aaKnown RBP eCLIP5.87□□□□□ -1.47
CBWD3-215ENST00000619322 ALDH7A1P49419 539 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms