RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 GPR37L1O60883 481 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 LMNAP02545 664 aaKnown RBP7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CA4P22748 312 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 INHBEP58166 350 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 SREBF2Q12772 1141 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 MFSD5Q6N075 450 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CCDC62Q6P9F0 684 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 ZDHHC24Q6UX98 284 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 DEPTORQ8TB45 409 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 CKAP2Q8WWK9 683 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 MAGEB18Q96M61 343 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 FGD4Q96M96 766 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 TIPINQ9BVW5 301 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 POLR3FQ9H1D9 316 aaPredicted RBP7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 TMEM206Q9H813 350 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 WHRNQ9P202 907 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 ZFATQ9P243 1243 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 ANAPC7Q9UJX3 599 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 AGAP1Q9UPQ3 857 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 IKBKGQ9Y6K9 419 aa7.37□□□□□ -1.23
SRGAP3-213ENST00000618999 IGSF9BQ9UPX0 1349 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 TTC4O95801 387 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 PYGMP11217 842 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 CDC25CP30307 473 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 VAMP7P51809 220 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 ITGA8P53708 1063 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 BNIP1Q12981 228 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 BIRC2Q13490 618 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 EMC2Q15006 297 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF792Q3KQV3 632 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 LIN9Q5TKA1 542 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC20A1Q8WUM9 679 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 CCDC127Q96BQ5 260 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 SIX2Q9NPC8 291 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 AGPAT3Q9NRZ7 376 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 UVRAGQ9P2Y5 699 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 STOML1Q9UBI4 398 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 EXOC7Q9UPT5 735 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 NPTX2P47972 431 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 MRPS35P82673 323 aaKnown RBP7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 LMNB2Q03252 620 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 RNASELQ05823 741 aaKnown RBP7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 LAMC2Q13753 1193 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 AGERQ15109 404 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 PRAMEF19Q5SWL8 479 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 ABRAQ8N0Z2 381 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 ARHGAP24Q8N264 748 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 ART4Q93070 314 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 NT5C1BQ96P26 610 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 TINF2Q9BSI4 451 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 GRHL1Q9NZI5 618 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 AJAP1Q9UKB5 411 aaPredicted RBP7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 DNMT3AQ9Y6K1 912 aaPredicted RBP7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 OTOFQ9HC10 1997 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 RLFQ13129 1914 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 UBE4BO95155 1302 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 HOXA2O43364 376 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 GH1P01241 217 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 HOXD13P35453 343 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 MARCKSL1P49006 195 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 POU5F1Q01860 360 aaKnown RBP7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 ALCAMQ13740 583 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 BMT2Q1RMZ1 405 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 DCAF12L1Q5VU92 463 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 ZC3H3Q8IXZ2 948 aaKnown RBP7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 ATL2Q8NHH9 583 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 AFG1LQ8WV93 481 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 MAML3Q96JK9 1138 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 FAM167AQ96KS9 214 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 C9orf72Q96LT7 481 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 GPR20Q99678 358 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 SMARCAD1Q9H4L7 1026 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 VTA1Q9NP79 307 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 SCOCQ9UIL1 159 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 DCTN4Q9UJW0 460 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 PAPPA2Q9BXP8 1791 aa7.36□□□□□ -1.23
SRGAP3-213ENST00000618999 GOLGA8IPA6NC78 632 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC15A5A6NIM6 579 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 GOLGA8JA6NMD2 632 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 HNRNPDLO14979 420 aaKnown RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 DYNC1LI2O43237 492 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TGFB1I1O43294 461 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SPAG7O75391 227 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 UNC5CO95185 931 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TARSP26639 723 aaKnown RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CBWD6Q4V339 395 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CBWD3Q5JTY5 395 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CBWD5Q5RIA9 395 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 IZUMO3Q5VZ72 239 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC30A9Q6PML9 568 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 LONP2Q86WA8 852 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF668Q96K58 619 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TCHPQ9BT92 498 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 IQCGQ9H095 443 aaKnown RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 ABHD16BQ9H3Z7 469 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 ZFP69BQ9UJL9 534 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 ZNF148Q9UQR1 794 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TISP43B9A030 160 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CYP26A1O43174 497 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms