RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 EMC1Q8N766 993 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 CFAP57Q96MR6 1250 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 ECT2Q9H8V3 914 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 NKIRAS1Q9NYS0 192 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 DRG1Q9Y295 367 aaKnown RBP20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 ZNF699Q32M78 642 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 CDCA2Q69YH5 1023 aaPredicted RBP20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 APOBEC3FQ8IUX4 373 aaKnown RBP20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 C4orf33Q8N1A6 199 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 KIF2BQ8N4N8 673 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 SEPT1Q8WYJ6 367 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 VPS37BQ9H9H4 285 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 ANK1P16157 1881 aa20.29■□□□□ 0.84
PCDHGB3-202ENST00000618934 A0A1W2PPM1 405 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 ATP6V1G2O95670 118 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 CDH5P33151 784 aaPredicted RBP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 NRLP54845 237 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 PIGHQ14442 188 aaPredicted RBP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 TAF5Q15542 800 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 MSS51Q4VC12 460 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 ARHGEF18Q6ZSZ5 1173 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 PNMA8AQ86V59 439 aaPredicted RBP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 RHPN2Q8IUC4 686 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 SLC16A10Q8TF71 515 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 PRCCQ92733 491 aaPredicted RBP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 ARL2BPQ9Y2Y0 163 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 EVPLQ92817 2033 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 FAM47DPA6NHR8 397 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 LRCH4O75427 683 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 PGK2P07205 417 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 CD19P15391 556 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 GPX6P59796 221 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 SLC25A11Q02978 314 aaKnown RBP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 PDIA2Q13087 525 aaKnown RBP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 EFTUD2Q15029 972 aaKnown RBP eCLIP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 E2F5Q15329 346 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 FAM160B1Q5W0V3 765 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 CEP57Q86XR8 500 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 SLC35B2Q8TB61 432 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 ACTL9Q8TC94 416 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 DENND1AQ8TEH3 1009 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 NKD2Q969F2 451 aaPredicted RBP20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 SDCBP2Q9H190 292 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 MINDY3Q9H8M7 445 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 HMGXB4Q9UGU5 601 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 PCDHGC3Q9UN70 934 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 SNCAIPQ9Y6H5 919 aa20.28■□□□□ 0.84
PCDHGB3-202ENST00000618934 ALOX15BO15296 676 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 CSDE1O75534 798 aaKnown RBP20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 ASMTLO95671 621 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 EIF4BP23588 611 aaKnown RBP20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 PSMA2P25787 234 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 EFNA5P52803 228 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 IRX3P78415 501 aaPredicted RBP20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 OTUD4Q01804 1114 aaKnown RBP20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 BNIP1Q12981 228 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 VGLL4Q14135 290 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 SH3D19Q5HYK7 790 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 FNBP1LQ5T0N5 605 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 IER5Q5VY09 327 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 ECHDC2Q86YB7 292 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 CPXM1Q96SM3 734 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 TRABDQ9H4I3 376 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 SLCO1B3Q9NPD5 702 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 BAIAP2L1Q9UHR4 511 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 ACTL7BQ9Y614 415 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 ITGAVP06756 1048 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 IQCF3P0C7M6 154 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 RPA3P35244 121 aaPredicted RBP20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 AP3M2P53677 418 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 COPS2P61201 443 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 DNAJC3Q13217 504 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 GRM1Q13255 1194 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 MORF4L2Q15014 288 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 MTFR1Q15390 333 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 MAPK6Q16659 721 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 PPP1R2P3Q6NXS1 205 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 METTL7BQ6UX53 244 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 NIPA2Q8N8Q9 360 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 TWNKQ96RR1 684 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 WDR83Q9BRX9 315 aaKnown RBP20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 FOXP3Q9BZS1 431 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 NOD2Q9HC29 1040 aa20.27■□□□□ 0.84
PCDHGB3-202ENST00000618934 PTPRFP10586 1907 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 TCRBV7S3A2A0A539 114 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 SOCS7O14512 581 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 PTPN7P35236 360 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 NEDD9Q14511 834 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 NOL9Q5SY16 702 aaKnown RBP20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 RIOX2Q8IUF8 465 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 COPS5Q92905 334 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 NLRP4Q96MN2 994 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 PTPRHQ9HD43 1115 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 PCSK1NQ9UHG2 260 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 SIX4Q9UIU6 781 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 CLUHO75153 1309 aa20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 IGF2BP3O00425 579 aaKnown RBP eCLIP20.26■□□□□ 0.83
PCDHGB3-202ENST00000618934 CST8O60676 142 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms