RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 JOSD2Q8TAC2 188 aa18.33■□□□□ 0.53
PCDHGC3-205ENST00000617641 ATG4AQ8WYN0 398 aa18.33■□□□□ 0.53
PCDHGC3-205ENST00000617641 ZIM3Q96PE6 472 aa18.33■□□□□ 0.53
PCDHGC3-205ENST00000617641 GTF2IRD1Q9UHL9 959 aa18.33■□□□□ 0.53
PCDHGC3-205ENST00000617641 PTPN22Q9Y2R2 807 aa18.33■□□□□ 0.53
PCDHGC3-205ENST00000617641 SNX24Q9Y343 169 aa18.33■□□□□ 0.53
PCDHGC3-205ENST00000617641 IPPQ9Y573 584 aa18.33■□□□□ 0.53
PCDHGC3-205ENST00000617641 PDCD11Q14690 1871 aaKnown RBP18.33■□□□□ 0.53
PCDHGC3-205ENST00000617641 SCN10AQ9Y5Y9 1956 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 HMGCRP04035 888 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 HSPA9P38646 679 aaKnown RBP18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 GPD2P43304 727 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 PDCLQ13371 301 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 SNX1Q13596 522 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 GDF6Q6KF10 455 aaPredicted RBP18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 TAF2Q6P1X5 1199 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 ANKS1BQ7Z6G8 1248 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 LRRC52Q8N7C0 313 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 LRRC19Q9H756 370 aa18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 UBQLN1Q9UMX0 589 aaKnown RBP18.33■□□□□ 0.52
PCDHGC3-205ENST00000617641 SIGLEC16A6NMB1 481 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 KRT3P12035 628 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 FNTAP49354 379 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 MRPS6P82932 125 aaKnown RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 CFAP58Q5T655 872 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 SESTD1Q86VW0 696 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 TTC39CQ8N584 583 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 ARRDC4Q8NCT1 418 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 SMG8Q8ND04 991 aaKnown RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 EXD1Q8NHP7 514 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 PIK3R5Q8WYR1 880 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 WNT8BQ93098 351 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 RNF25Q96BH1 459 aaPredicted RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 UPF3AQ9H1J1 476 aaKnown RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 CHST7Q9NS84 486 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 NME7Q9Y5B8 376 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 CDY2AQ9Y6F7 541 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 PI4K2BG5E9Z4 385 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 SEPT4O43236 478 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 PIGHQ14442 188 aaPredicted RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 FAM47CQ5HY64 1035 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 TXNRD3NBQ6F5E7 133 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 TWF2Q6IBS0 349 aaKnown RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 ACOT1Q86TX2 421 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 IQCKQ8N0W5 287 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 HHIPL1Q96JK4 782 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 FAM124BQ9H5Z6 455 aaPredicted RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 SPC25Q9HBM1 224 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 GOLGA2P5Q9HBQ8 144 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 METTL5Q9NRN9 209 aaKnown RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 TSPAN16Q9UKR8 245 aa18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 R3HDM2Q9Y2K5 976 aaKnown RBP18.32■□□□□ 0.52
PCDHGC3-205ENST00000617641 AOC2O75106 756 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 MYCNP04198 464 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 RARBP10826 455 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 ZFYVE27Q5T4F4 411 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 LCLAT1Q6UWP7 414 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 EMC1Q8N766 993 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 NIPA2Q8N8Q9 360 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 RUFY1Q96T51 708 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 OSBPL8Q9BZF1 889 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 PODXLO00592 558 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 CTSHP09668 335 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 PSMA2P25787 234 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 RPL21P46778 160 aaKnown RBP18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 SOX4Q06945 474 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 KLF1Q13351 362 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 GOLGA7BQ2TAP0 167 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 SMC1BQ8NDV3 1235 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 MAIP1Q8WWC4 291 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 ACSF2Q96CM8 615 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 RUNDC3BQ96NL0 473 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 SH3GL2Q99962 352 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 GPBP1L1Q9HC44 474 aaPredicted RBP18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 ZDHHC18Q9NUE0 388 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 LCMT1Q9UIC8 334 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 ADAM21Q9UKJ8 722 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 KIAA1257Q9ULG3 409 aa18.31■□□□□ 0.52
PCDHGC3-205ENST00000617641 M0QZ92 97 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 PIK3R2O00459 728 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 ALDH1A1P00352 501 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 KRT1P04264 644 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 KCNE1P15382 129 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 CCND3P30281 292 aaPredicted RBP18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 GABRB2P47870 512 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 GSCP56915 257 aaPredicted RBP18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 ZNF268Q14587 947 aaPredicted RBP18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 SOWAHAQ2M3V2 549 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 XKR4Q5GH76 650 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 PPP1R26Q5T8A7 1209 aaPredicted RBP18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 FMO2Q99518 471 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 DCLK3Q9C098 648 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 FAM49BQ9NUQ9 324 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 GRHL1Q9NZI5 618 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 WDR35Q9P2L0 1181 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 TRPV2Q9Y5S1 764 aa18.3■□□□□ 0.52
PCDHGC3-205ENST00000617641 PIRO00625 290 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 SPTLC1O15269 473 aa18.29■□□□□ 0.52
PCDHGC3-205ENST00000617641 HCRTO43612 131 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms