RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 RIPK2O43353 540 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 MOCS2O96007 188 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM58BPP0C7Q3 252 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SOX11P35716 441 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 XKR3Q5GH77 459 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 TRIM69Q86WT6 500 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SHCBP1Q8NEM2 672 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SCFD2Q8WU76 684 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 FAM162AQ96A26 154 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 TUBGCP3Q96CW5 907 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 RMDN1Q96DB5 314 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 KANSL1LA0AUZ9 987 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 CYP19A1P11511 503 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 RGS7P49802 495 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 GRB10Q13322 594 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 PLEKHA7Q6IQ23 1121 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 GPAT2Q6NUI2 795 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 CRELD2Q6UXH1 353 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 ZNF571Q7Z3V5 609 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 RBBP8Q99708 897 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SH2D3AQ9BRG2 576 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 EHD4Q9H223 541 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SEMA6BQ9H3T3 888 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 RIC8BQ9NVN3 520 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 OVOS2A0A0G2JMS6 1433 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 PRKCBP05771 671 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 CYP11B2P19099 503 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 GRK2P25098 689 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 RFX5P48382 616 aaPredicted RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SULT1E1P49888 294 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 PPIDQ08752 370 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 BOLA3Q53S33 107 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 TWF2Q6IBS0 349 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 CCDC81Q6ZN84 652 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 CCNJLQ8IV13 435 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 EIF1ADQ8N9N8 165 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 RNF149Q8NC42 400 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SPON2Q9BUD6 331 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 TMEM245Q9H330 911 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 OSGEPQ9NPF4 335 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 GDF3Q9NR23 364 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SERPINB5P36952 375 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 OTUD4Q01804 1114 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SWT1Q5T5J6 900 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 LRRC74BQ6ZQY2 392 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 LPCAT2Q7L5N7 544 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 SLC26A11Q86WA9 606 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 TNIP2Q8NFZ5 429 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 MPP4Q96JB8 637 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 BBS2Q9BXC9 721 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 METTL5Q9NRN9 209 aaKnown RBP11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 LRFN2Q9ULH4 789 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 AGAP1Q9UPQ3 857 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 DNAJC16Q9Y2G8 782 aa11.09□□□□□ -0.63
CLTCL1-209ENST00000617103 H2AFYO75367 372 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 RASSF9O75901 435 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 CSF1RP07333 972 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 ITGA4P13612 1032 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 RECQLP46063 649 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 RBP5P82980 135 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 PTK2BQ14289 1009 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 CCNG2Q16589 344 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 SPDYAQ5MJ70 313 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 KDELC2Q7Z4H8 507 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 CREG2Q8IUH2 290 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 FAR2Q96K12 515 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 ZNF668Q96K58 619 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 JPH1Q9HDC5 661 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 TMEM161AQ9NX61 479 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 APPL1Q9UKG1 709 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 MTSS1O43312 755 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 GPD1P21695 349 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 PTGER2P43116 358 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 SARSP49591 514 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 ZBTB49Q6ZSB9 765 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 TSEN2Q8NCE0 465 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 ZFRQ96KR1 1074 aaKnown RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 PPP1R2P1Q96PQ5 205 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 MED15Q96RN5 788 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 PRR23D1E9PI22 279 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 PRR23D2P0DMB1 279 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 ZNF23P17027 643 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 TFE3P19532 575 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 GTF2H1P32780 548 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 NT5DC1Q5TFE4 455 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 BTBD8Q5XKL5 378 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 STMN3Q9NZ72 180 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 LMCD1Q9NZU5 365 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 V9GYQ6 96 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 EPHB2P29323 1055 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 GPSM2P81274 684 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 FAM83EQ2M2I3 478 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 TTC23LQ6PF05 361 aa11.08□□□□□ -0.64
CLTCL1-209ENST00000617103 ASIC4Q96FT7 647 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms