RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 SH3GL2Q99962 352 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 KIF9Q9HAQ2 790 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 A6NJR5 290 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 CPP00450 1065 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 HOXD8P13378 290 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 KRT10P13645 584 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 UBAP2Q5T6F2 1119 aaKnown RBP16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 PRUNE1Q86TP1 453 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 EMC1Q8N766 993 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 TMEM40Q8WWA1 233 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 C18orf25Q96B23 403 aaPredicted RBP16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 VCPIP1Q96JH7 1222 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 HEXIM2Q96MH2 286 aaKnown RBP16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 BCO2Q9BYV7 579 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 KLK14Q9P0G3 267 aa16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.46■□□□□ 0.23
SEMA3B-212ENST00000616701 OPA1O60313 960 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 GPR32O75388 356 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 HSPA6P17066 643 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 PPP1R7Q15435 360 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 RHOT1Q8IXI2 618 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 MREGQ8N565 214 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 FAM76AQ8TAV0 307 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 SEC14L1Q92503 715 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 CCDC97Q96F63 343 aaPredicted RBP16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 NXF3Q9H4D5 531 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 RABEP2Q9H5N1 569 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 ASB7Q9H672 318 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 TUBGCP4Q9UGJ1 667 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 RASAL2Q9UJF2 1139 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 FAM187AA6NFU0 413 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 TMEM191CA6NGB0 347 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 FSCN2O14926 492 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 CALB1P05937 261 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 PTPN11Q06124 597 aaPredicted RBP16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 ZDHHC24Q6UX98 284 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 TMC3Q7Z5M5 1100 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 C12orf29Q8N999 325 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 JOSD2Q8TAC2 188 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 UHMK1Q8TAS1 419 aaKnown RBP16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 CPXM1Q96SM3 734 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 ZIC5Q96T25 663 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 GCOM2Q9BZD3 368 aaPredicted RBP16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 SYNCQ9H7C4 482 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 PCYOX1Q9UHG3 505 aa16.45■□□□□ 0.22
SEMA3B-212ENST00000616701 F2P00734 622 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 PSMC4P43686 418 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 CCDC114Q96M63 670 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 LPIN3Q9BQK8 851 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 ZDHHC18Q9NUE0 388 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 GRHL1Q9NZI5 618 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 CITO14578 2027 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 M0QYV0 167 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 CILPO75339 1184 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 MICAL2O94851 1124 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 ATF7P17544 494 aaPredicted RBP16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 PSEN2P49810 448 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 ATP1A2P50993 1020 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 NDST1P52848 882 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 YWHAEP62258 255 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 MTA1Q13330 715 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 CLUL1Q15846 466 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 PPP2R5EQ16537 467 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 ZNF410Q86VK4 478 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 LRRC45Q96CN5 670 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 HAUS1Q96CS2 278 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 TMEM176AQ96HP8 235 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 PLVAPQ9BX97 442 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 IP6K2Q9UHH9 426 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 ZSWIM8A7E2V4 1837 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 RRN3P2A6NIE6 340 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 HCRTO43612 131 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 LSM8O95777 96 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 RFC1P35251 1148 aaPredicted RBP16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 PSMC1P62191 440 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 SMTNL2Q2TAL5 461 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 MFSD4BQ5TF39 518 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 SPATS2LQ9NUQ6 558 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 PCDHGC3Q9UN70 934 aa16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 PIN4Q9Y237 131 aaKnown RBP16.44■□□□□ 0.22
SEMA3B-212ENST00000616701 TCRBV5S1A1TA0A578 114 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 ANKRD33BA6NCL7 494 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 MYADML2A6NDP7 307 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 GOLGA8KD6RF30 607 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 TNPO2O14787 897 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 ERBB2P04626 1255 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 CTGFP29279 349 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 KRT17Q04695 432 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 CYP1B1Q16678 543 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 CCDC25Q86WR0 208 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 DNAJC17Q9NVM6 304 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 GJD2Q9UKL4 321 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 SNX9Q9Y5X1 595 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 SCN1AP35498 2009 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 NRCAMQ92823 1304 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 KRT1P04264 644 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 EIF4BP23588 611 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 RBP5P82980 135 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 OSBPL8Q9BZF1 889 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms