RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TCHHL1Q5QJ38 904 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 C6orf183Q5T699 404 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 DPP8Q6V1X1 898 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 NUP93Q8N1F7 819 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 DQX1Q8TE96 717 aaKnown RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 FAM172AQ8WUF8 416 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 IL17RBQ9NRM6 502 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 APEX2Q9UBZ4 518 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 POLLQ9UGP5 575 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 DNM3Q9UQ16 869 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 DMTF1Q9Y222 760 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 AK5Q9Y6K8 562 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 SPTLC1O15269 473 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 SORBS3O60504 671 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 PDGFRBP09619 1106 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 SRGAP2CP0DJJ0 459 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 SRGAP2BP0DMP2 458 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 RAP1GDS1P52306 607 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 ITGA7Q13683 1181 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 CYP1B1Q16678 543 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 DIS3LQ8TF46 1054 aaKnown RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 PRICKLE1Q96MT3 831 aaPredicted RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 PAIP1Q9H074 479 aaKnown RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 TUT1Q9H6E5 874 aaKnown RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 TAGLN3Q9UI15 199 aa10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 RBMX2Q9Y388 322 aaKnown RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 HBS1LQ9Y450 684 aaKnown RBP10.87□□□□□ -0.67
TNFAIP3-208ENST00000615468 PDXKO00764 312 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 PPEF1O14829 653 aaPredicted RBP10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 TFAP2AP05549 437 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 ATF7P17544 494 aaPredicted RBP10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 STT3AP46977 705 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 EIF2B2P49770 351 aaKnown RBP10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 ATP1A4Q13733 1029 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 TMEM119Q4V9L6 283 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 SPDYAQ5MJ70 313 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 MYCT1Q8N699 235 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 TEKT1Q969V4 418 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 INPP5FQ9Y2H2 1132 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 TRIM17Q9Y577 477 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 NUP188Q5SRE5 1749 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 UTRNP46939 3433 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 AKAP11Q9UKA4 1901 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 LOC100653049A0A140TA62 436 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 KRT34O76011 436 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 FAM13AO94988 1023 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 ZSCAN5DPP0CG00 497 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 RALAP11233 206 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 KRT72Q14CN4 511 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 PALM2Q8IXS6 379 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 PPM1KQ8N3J5 372 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 PYROXD1Q8WU10 500 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 CCT7Q99832 543 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 REEP2Q9BRK0 252 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 DCLK3Q9C098 648 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 GPCPD1Q9NPB8 672 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 ADAMTS6Q9UKP5 1117 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 CLEC11AQ9Y240 323 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 HOXA7P31268 230 aaPredicted RBP10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 ENTPD1P49961 510 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 EFTUD2Q15029 972 aaKnown RBP eCLIP10.86□□□□□ -0.676e-6■■□□□ 13.1
TNFAIP3-208ENST00000615468 OASLQ15646 514 aaKnown RBP10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 ZBTB46Q86UZ6 589 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 LRGUKQ96M69 825 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 TRIM56Q9BRZ2 755 aaKnown RBP10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 ARMC7Q9H6L4 198 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 TBC1D23Q9NUY8 699 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 FAIMQ9NVQ4 179 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 PACSIN3Q9UKS6 424 aa10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 DDX60Q8IY21 1712 aaKnown RBP10.86□□□□□ -0.67
TNFAIP3-208ENST00000615468 FRMPD4Q14CM0 1322 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 DCAF8L1A6NGE4 600 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 PRR5-ARHGAP8B1AHC4 643 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 IVDP26440 423 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SSTR1P30872 391 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 RXRGP48443 463 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 AQP5P55064 265 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 ARHGAP8P85298 464 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 CBWD6Q4V339 395 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 CBWD3Q5JTY5 395 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 CBWD5Q5RIA9 395 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 ITPRIPL1Q6GPH6 555 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 C16orf87Q6PH81 154 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SYDE1Q6ZW31 735 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 LPCAT2Q7L5N7 544 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 MIER3Q7Z3K6 550 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SLC15A3Q8IY34 581 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SHKBP1Q8TBC3 707 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 SKA1Q96BD8 255 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 ZFRQ96KR1 1074 aaKnown RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 CSRNP1Q96S65 589 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 BCAS3Q9H6U6 928 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 HOMER2Q9NSB8 354 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 GINM1Q9NU53 330 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 NENFQ9UMX5 172 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 TP73O15350 636 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 TBC1D12O60347 775 aa10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 FOXD2O60548 495 aaPredicted RBP10.85□□□□□ -0.67
TNFAIP3-208ENST00000615468 LDHAP00338 332 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms