RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 HPDP32754 393 aaPredicted RBP20.22■□□□□ 0.83
MMP28-204ENST00000615136 GJC1P36383 396 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 KCNJ1P48048 391 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 PMS2P54278 862 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 YWHAEP62258 255 aaKnown RBP20.22■□□□□ 0.83
MMP28-204ENST00000615136 PTPN11Q06124 597 aaPredicted RBP20.22■□□□□ 0.83
MMP28-204ENST00000615136 ATP13A4Q4VNC1 1196 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 PPP1R15BQ5SWA1 713 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 ERICH1Q86X53 443 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 SLCO2A1Q92959 643 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 FAM129AQ9BZQ8 928 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 RABEP2Q9H5N1 569 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 LRRC19Q9H756 370 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 RALGAPA2Q2PPJ7 1873 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 FSCN2O14926 492 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 CALB1P05937 261 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 RBP5P82980 135 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 TRIM32Q13049 653 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 KRT71Q3SY84 523 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 NOTUMQ6P988 496 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 TRIB2Q92519 343 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 TMEM176AQ96HP8 235 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 KLHL11Q9NVR0 708 aa20.22■□□□□ 0.83
MMP28-204ENST00000615136 F8VP50 259 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 RECQL4O94761 1208 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 PAEPP09466 180 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 C6orf222P0C671 652 aaPredicted RBP20.21■□□□□ 0.83
MMP28-204ENST00000615136 CYP3A5P20815 502 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 ZBTB6Q15916 424 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 DNAJC24Q6P3W2 148 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 C1orf54Q8WWF1 131 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 CPXM1Q96SM3 734 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 ZNF518BQ9C0D4 1074 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 ABT1Q9ULW3 272 aaKnown RBP20.21■□□□□ 0.83
MMP28-204ENST00000615136 PIN4Q9Y237 131 aaKnown RBP20.21■□□□□ 0.83
MMP28-204ENST00000615136 Q9Y3F1 56 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 NME7Q9Y5B8 376 aa20.21■□□□□ 0.83
MMP28-204ENST00000615136 ATXN2Q99700 1313 aaKnown RBP20.21■□□□□ 0.83
MMP28-204ENST00000615136 C17orf102A2RUQ5 167 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 AKR1A1P14550 325 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 HOXC8P31273 242 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 NDST1P52848 882 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 PPP2R2AP63151 447 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 UBXN11Q5T124 520 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 ALKAL1Q6UXT8 129 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 DPH6Q7L8W6 267 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 HOOK3Q86VS8 718 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 C10orf67Q8IYJ2 551 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 CCDC105Q8IYK2 499 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 TLCD1Q96CP7 247 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 LHX5Q9H2C1 402 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 KLK14Q9P0G3 267 aa20.2■□□□□ 0.83
MMP28-204ENST00000615136 MTRF1LQ9UGC7 380 aaKnown RBP20.2■□□□□ 0.83
MMP28-204ENST00000615136 GOLGA8SH3BPF8 625 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 MICAL2O94851 1124 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 PGK1P00558 417 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 SSR1P43307 286 aaKnown RBP20.2■□□□□ 0.82
MMP28-204ENST00000615136 CDC42EP1Q00587 391 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 IFFO1Q0D2I5 559 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 TXNRD3NBQ6F5E7 133 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 PPP1R2P3Q6NXS1 205 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.2■□□□□ 0.82
MMP28-204ENST00000615136 ATG4AQ8WYN0 398 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 HEMGNQ9BXL5 484 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 RASSF4Q9H2L5 321 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 CYP3A43Q9HB55 503 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 LRRC4CQ9HCJ2 640 aa20.2■□□□□ 0.82
MMP28-204ENST00000615136 NOVA2Q9UNW9 492 aaKnown RBP20.2■□□□□ 0.82
MMP28-204ENST00000615136 ERBB2P04626 1255 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 CYBAP13498 195 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 PSMC4P43686 418 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 TM4SF4P48230 202 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 INCA1Q0VD86 236 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 SREBF2Q12772 1141 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 SKIDA1Q1XH10 827 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 RHOT1Q8IXI2 618 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 C7orf31Q8N865 590 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 JOSD2Q8TAC2 188 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 ART4Q93070 314 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 FAXDC2Q96IV6 333 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 MRPL45Q9BRJ2 306 aaKnown RBP20.19■□□□□ 0.82
MMP28-204ENST00000615136 CHST7Q9NS84 486 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.19■□□□□ 0.82
MMP28-204ENST00000615136 R3HDM2Q9Y2K5 976 aaKnown RBP20.19■□□□□ 0.82
MMP28-204ENST00000615136 PTPN22Q9Y2R2 807 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 CA12O43570 354 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 ECEL1O95672 775 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 RALAP11233 206 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 MAGEA9P43362 315 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 SNX1Q13596 522 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 DENND2CQ68D51 928 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 CXCL17Q6UXB2 119 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 B4GALNT4Q76KP1 1039 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 NT5DC4Q86YG4 428 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 C12orf29Q8N999 325 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 C3orf20Q8ND61 904 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 UBA3Q8TBC4 463 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 MYCBPAPQ8TBZ2 947 aa20.19■□□□□ 0.82
MMP28-204ENST00000615136 RNF25Q96BH1 459 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms