RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TPSD1Q9BZJ3 242 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 AMBRA1Q9C0C7 1298 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 RIOX1Q9H6W3 641 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 ATP6V0A4Q9HBG4 840 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 KLC4Q9NSK0 619 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 TLK1Q9UKI8 766 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 PAXBP1Q9Y5B6 917 aa6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.31□□□□□ -1.4
SCAMP1-205ENST00000614488 DCLK1O15075 740 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 FRS3O43559 492 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 GRIA3P42263 894 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 ZNF134P52741 427 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 MAPK10P53779 464 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 WNT3P56703 355 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 IQCB1Q15051 598 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 GFOD2Q3B7J2 385 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 LAYNQ6UX15 382 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 TMEM108Q6UXF1 575 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 ZNF783Q6ZMS7 281 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 TSHZ1Q6ZSZ6 1077 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 PBKQ96KB5 322 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 P2RX7Q99572 595 aaKnown RBP6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 ACTRT3Q9BYD9 372 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 TTYH3Q9C0H2 523 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 XPR1Q9UBH6 696 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 L1RE1Q9UN81 338 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 TMX2Q9Y320 296 aa6.3□□□□□ -1.4
SCAMP1-205ENST00000614488 ADGRA2Q96PE1 1338 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 A0A087WWL8 130 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 ADM5C9JUS6 153 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 CHRM2P08172 466 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 CYP2C9P11712 490 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 EN2P19622 333 aaPredicted RBP6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 PPIFP30405 207 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 SLC11A2P49281 568 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 CACNA2D1P54289 1103 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 NANOS3P60323 173 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 GBX1Q14549 363 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 TEDDM1Q5T9Z0 273 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 SWSAP1Q6NVH7 229 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 SRGAP1Q7Z6B7 1085 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 PEG10Q86TG7 708 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 DNAJC10Q8IXB1 793 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 OR6B3Q8NGW1 331 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 IL31RAQ8NI17 732 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 TFAP2BQ92481 460 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 ANKS1AQ92625 1134 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 TSR2Q969E8 191 aaKnown RBP6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 SLC17A6Q9P2U8 582 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 SHOC2Q9UQ13 582 aa6.29□□□□□ -1.4
SCAMP1-205ENST00000614488 MYO1CO00159 1063 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 MGST3O14880 152 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 PPFIA2O75334 1257 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 HRGP04196 525 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 KITP10721 976 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 XRCC6P12956 609 aaKnown RBP eCLIP6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 PXNP49023 591 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 CACNB3P54284 484 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 UCP3P55916 312 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 CNN3Q15417 329 aaKnown RBP6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 VPS53Q5VIR6 699 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 ICE2Q659A1 982 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 LMBRD2Q68DH5 695 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 CHST15Q7LFX5 561 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 GRASPQ7Z6J2 395 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 FKBP10Q96AY3 582 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 SUCLG2Q96I99 432 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 PTDSS2Q9BVG9 487 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 C22orf23Q9BZE7 217 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 PRDM13Q9H4Q3 707 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 PRDM11Q9NQV5 511 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 EHD3Q9NZN3 535 aa6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.28□□□□□ -1.4
SCAMP1-205ENST00000614488 A6NNZ2 444 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 VSTM5A8MXK1 200 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 MYO1FO00160 1098 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 URI1O94763 535 aaPredicted RBP6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 ZBED1O96006 694 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 RHOP08100 348 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 LILRA4P59901 499 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 SATB1Q01826 763 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 ADGRG3Q86Y34 549 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 TTC8Q8TAM2 541 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 ATRIPQ8WXE1 791 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 CRAMP1Q96RY5 1269 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 KIAA1586Q9HCI6 787 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 DDX20Q9UHI6 824 aaKnown RBP6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 ENTPD2Q9Y5L3 495 aa6.27□□□□□ -1.41
SCAMP1-205ENST00000614488 VWC2LB2RUY7 222 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 BTN3A1O00481 513 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 NXPH3O95157 252 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 LRPAP1P30533 357 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 SLC7A1P30825 629 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 RAB32Q13637 225 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 APOA5Q6Q788 366 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 DTX2Q86UW9 622 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 GAS2L3Q86XJ1 694 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 COL23A1Q86Y22 540 aaPredicted RBP6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 DNAJC5GQ8N7S2 189 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms