RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 HNRNPABQ99729 332 aaKnown RBP6.64□□□□□ -1.35
CBWD3-210ENST00000614398 VN1R3Q9BXE9 311 aa6.64□□□□□ -1.35
CBWD3-210ENST00000614398 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.64□□□□□ -1.35
CBWD3-210ENST00000614398 FAM53CQ9NYF3 392 aa6.64□□□□□ -1.35
CBWD3-210ENST00000614398 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.64□□□□□ -1.35
CBWD3-210ENST00000614398 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
CBWD3-210ENST00000614398 IRAK3Q9Y616 596 aa6.64□□□□□ -1.35
CBWD3-210ENST00000614398 PLXNA3P51805 1871 aa6.64□□□□□ -1.35
CBWD3-210ENST00000614398 NCANO14594 1321 aa6.64□□□□□ -1.35
CBWD3-210ENST00000614398 TMEM265A0A087WTH1 108 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 TTC36A6NLP5 189 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 O00370 1275 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 FSCN2O14926 492 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 CYP26A1O43174 497 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 LILRB3O75022 631 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 ITGB1P05556 798 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 WEE2P0C1S8 567 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 GNA15P30679 374 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 BMPR1AP36894 532 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SCNN1AP37088 669 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 MAGEA11P43364 429 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 BRCC3P46736 316 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SMAD3P84022 425 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 FMO1Q01740 532 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SHHQ15465 462 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 USP41Q3LFD5 358 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SGO2Q562F6 1265 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 INTS6LQ5JSJ4 861 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 OVOS1Q6IE37 1185 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 ZNF280DQ6N043 979 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 ZNF571Q7Z3V5 609 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SCML4Q8N228 414 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 TMEM130Q8N3G9 435 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 MYCBPAPQ8TBZ2 947 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 CPLX3Q8WVH0 158 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 FUBP3Q96I24 572 aaKnown RBP eCLIP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 VCPIP1Q96JH7 1222 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 TWNKQ96RR1 684 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SYT15Q9BQS2 421 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 TTPALQ9BTX7 342 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 ISCUQ9H1K1 167 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 HAUS4Q9H6D7 363 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 NHEJ1Q9H9Q4 299 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 PNPLA8Q9NP80 782 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 PCNTO95613 3336 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 ATG2AQ2TAZ0 1938 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 LINC01553A4QN01 128 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SPDYE4A6NLX3 237 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 H0YGN5 161 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 DDX3XO00571 662 aaKnown RBP eCLIP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 PJA2O43164 708 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 CCP110O43303 1012 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 TLL1O43897 1013 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 UPP2O95045 317 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 NDUFA10O95299 355 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 UNGP13051 313 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 KRT5P13647 590 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 EIF4A3P38919 411 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 RAP1GAPP47736 663 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 CDH8P55286 799 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 CENPCQ03188 943 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 NFE2Q16621 373 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 CLEC16AQ2KHT3 1053 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 C9orf50Q5SZB4 431 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 KIAA0319Q5VV43 1072 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SLC8B1Q6J4K2 584 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SCARA5Q6ZMJ2 495 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SLC47A2Q86VL8 602 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 PHF13Q86YI8 300 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 DCP1BQ8IZD4 617 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 B3GALNT2Q8NCR0 500 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 ZNF606Q8WXB4 792 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 TRIM11Q96F44 468 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 MMS19Q96T76 1030 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 ZSWIM1Q9BR11 485 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 UBE2OQ9C0C9 1292 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 ZBP1Q9H171 429 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 RASSF4Q9H2L5 321 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 LUC7LQ9NQ29 371 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 COMMD8Q9NX08 183 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 A8MXQ7 604 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 POU2F2P09086 479 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 MYBL1P10243 752 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 CTSAP10619 480 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 SKILP12757 684 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 PTPN1P18031 435 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 TKTP29401 623 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 GLUD2P49448 558 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 KIF11P52732 1056 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 HADHBP55084 474 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 KRT83P78385 493 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 YWHAHQ04917 246 aaPredicted RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 CFAP221Q4G0U5 840 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 PAN2Q504Q3 1202 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 VARS2Q5ST30 1063 aaKnown RBP6.63□□□□□ -1.35
CBWD3-210ENST00000614398 TPGS2Q68CL5 300 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 RAD9BQ6WBX8 426 aa6.63□□□□□ -1.35
CBWD3-210ENST00000614398 LNX1Q8TBB1 728 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms