RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 CYFIP2Q96F07 1278 aa14.62□□□□□ -0.07
TMEM254-213ENST00000613758 SLC9A7Q96T83 725 aa14.62□□□□□ -0.07
TMEM254-213ENST00000613758 LPIN3Q9BQK8 851 aa14.62□□□□□ -0.07
TMEM254-213ENST00000613758 PCDHGC3Q9UN70 934 aa14.62□□□□□ -0.07
TMEM254-213ENST00000613758 MRPL42Q9Y6G3 142 aaKnown RBP14.62□□□□□ -0.07
TMEM254-213ENST00000613758 FAM170AA1A519 330 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 O00370 1275 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 KRT86O43790 486 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 ATP2C2O75185 946 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 RTN2O75298 545 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 PTPN1P18031 435 aaKnown RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 TKTP29401 623 aaKnown RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 OVOS1Q6IE37 1185 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 FUT10Q6P4F1 479 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 KCNT2Q6UVM3 1135 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 TMEM173Q86WV6 379 aaPredicted RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 HERC6Q8IVU3 1022 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 THEM5Q8N1Q8 247 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 BCL7CQ8WUZ0 217 aaPredicted RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 ZNF558Q96NG5 402 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 GPR62Q9BZJ7 368 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 FAM49BQ9NUQ9 324 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 INSL6Q9Y581 213 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 SF3B1O75533 1304 aaKnown RBP eCLIP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 FTLP02792 175 aaPredicted RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 H2AFZP0C0S5 128 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 UNGP13051 313 aaPredicted RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 ATP2A2P16615 1042 aaKnown RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 PCSK1P29120 753 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 PSMC1P62191 440 aaKnown RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 ELAVL2Q12926 359 aaKnown RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 PPP1R26Q5T8A7 1209 aaPredicted RBP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 FAM171A1Q5VUB5 890 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 KIAA0319Q5VV43 1072 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 NAA35Q5VZE5 725 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 ACAD10Q6JQN1 1059 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 DENND1BQ6P3S1 775 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 LCLAT1Q6UWP7 414 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 H2AFVQ71UI9 128 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 TXLNBQ8N3L3 684 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 B3GALNT2Q8NCR0 500 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 CPA5Q8WXQ8 436 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 RTP3Q9BQQ7 232 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 SYT15Q9BQS2 421 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 PACSIN1Q9BY11 444 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 ISCUQ9H1K1 167 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 CDH9Q9ULB4 789 aa14.61□□□□□ -0.07
TMEM254-213ENST00000613758 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.61□□□□□ -0.07
TMEM254-213ENST00000613758 SYN3O14994 580 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 MICAL2O94851 1124 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 LAG3P18627 525 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 MAGEA10P43363 369 aaPredicted RBP14.6□□□□□ -0.07
TMEM254-213ENST00000613758 YWHAHQ04917 246 aaPredicted RBP14.6□□□□□ -0.07
TMEM254-213ENST00000613758 KIF5AQ12840 1032 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 STILQ15468 1287 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 ARHGAP17Q68EM7 881 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 CEP57Q86XR8 500 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 IGSF21Q96ID5 467 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 ACBD6Q9BR61 282 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 LHX5Q9H2C1 402 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 SALL4Q9UJQ4 1053 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 URI1O94763 535 aaPredicted RBP14.6□□□□□ -0.07
TMEM254-213ENST00000613758 OAZ2O95190 189 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 LSM8O95777 96 aaKnown RBP14.6□□□□□ -0.07
TMEM254-213ENST00000613758 FGFR3P22607 806 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 GALCP54803 685 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 NOMO3P69849 1222 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 RASIP1Q5U651 963 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 FIBCD1Q8N539 461 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 COLGALT1Q8NBJ5 622 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 TMEM35BQ8NCS4 154 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 RAD9AQ99638 391 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 TSGA10Q9BZW7 698 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 ZNF518BQ9C0D4 1074 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 TSPAN16Q9UKR8 245 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 INTUQ9ULD6 942 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 CEP83Q9Y592 693 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 PTPRSQ13332 1948 aa14.6□□□□□ -0.07
TMEM254-213ENST00000613758 CARNS1A5YM72 827 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 CCDC130P13994 396 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 GOLGA7BQ2TAP0 167 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 MDH1BQ5I0G3 518 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 TAS1R1Q7RTX1 841 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 SLC39A11Q8N1S5 342 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 WDTC1Q8N5D0 677 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 UBA3Q8TBC4 463 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 CRTAC1Q9NQ79 661 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 SPG21Q9NZD8 308 aa14.59□□□□□ -0.07
TMEM254-213ENST00000613758 MYBPHLA2RUH7 354 aa14.58□□□□□ -0.07
TMEM254-213ENST00000613758 ANKRD62A6NC57 917 aa14.58□□□□□ -0.07
TMEM254-213ENST00000613758 M0QYV0 167 aa14.58□□□□□ -0.07
TMEM254-213ENST00000613758 CTIFO43310 598 aaKnown RBP14.58□□□□□ -0.07
TMEM254-213ENST00000613758 TLL1O43897 1013 aa14.58□□□□□ -0.07
TMEM254-213ENST00000613758 ABCB4P21439 1286 aa14.58□□□□□ -0.07
TMEM254-213ENST00000613758 CDH5P33151 784 aaPredicted RBP14.58□□□□□ -0.07
TMEM254-213ENST00000613758 NSFP46459 744 aaKnown RBP14.58□□□□□ -0.07
TMEM254-213ENST00000613758 CENPCQ03188 943 aa14.58□□□□□ -0.07
TMEM254-213ENST00000613758 VARS2Q5ST30 1063 aaKnown RBP14.58□□□□□ -0.07
TMEM254-213ENST00000613758 C9orf50Q5SZB4 431 aa14.58□□□□□ -0.07
TMEM254-213ENST00000613758 C1orf131Q8NDD1 294 aaKnown RBP14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms