RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PRKCEQ02156 737 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 MTMR2Q13614 643 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 FAM83EQ2M2I3 478 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 LUZP2Q86TE4 346 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 CDC42BPAQ5VT25 1732 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 CNTFP26441 200 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 HMGCS2P54868 508 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 GALNT4Q8N4A0 578 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 DLGAP2Q9P1A6 1054 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 SFMBT1Q9UHJ3 866 aa18.13■□□□□ 0.49
HMGXB3-206ENST00000613459 MYO1GB0I1T2 1018 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 AIM2O14862 343 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 TADA2AO75478 443 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 RBP3P10745 1247 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 ITGA4P13612 1032 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 ANXA11P50995 505 aaKnown RBP18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 GEMP55040 296 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 NFIXQ14938 502 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 SLC13A5Q86YT5 568 aaPredicted RBP18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 L2HGDHQ9H9P8 463 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 KLHL11Q9NVR0 708 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 DCDC2Q9UHG0 476 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 PTPRUQ92729 1446 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 AKT1P31749 480 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 BARGINQ6ZT62 677 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 TMEM143Q96AN5 459 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 AGAP3Q96P47 875 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 NMRK1Q9NWW6 199 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 STMN3Q9NZ72 180 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 AP4S1Q9Y587 144 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 CST8O60676 142 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 CRYMQ14894 314 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 TTLL9Q3SXZ7 439 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 PTRHD1Q6GMV3 140 aaKnown RBP18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 OR2W6PQ8NHA6 318 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 ZSWIM1Q9BR11 485 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 PTGER2P43116 358 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 COPAP53621 1224 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 WDR93Q6P2C0 686 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 SUGP1Q8IWZ8 645 aaKnown RBP18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 PARK7Q99497 189 aaKnown RBP18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 IRX2Q9BZI1 471 aaPredicted RBP18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 LATS2Q9NRM7 1088 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 WHRNQ9P202 907 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 WBP4O75554 376 aaKnown RBP18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 PLOD1Q02809 727 aaPredicted RBP18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 TRAF7Q6Q0C0 670 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 KIF2BQ8N4N8 673 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 ZNF518BQ9C0D4 1074 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 ADGRB3O60242 1522 aa18.12■□□□□ 0.49
HMGXB3-206ENST00000613459 QRICH2Q9H0J4 1663 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 NBPF26B4DH59 902 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 O00370 1275 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 RGS7P49802 495 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 PDK2Q15119 407 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 SLC44A4Q53GD3 710 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 GPAT2Q6NUI2 795 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 NBPF15Q8N660 670 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 C17orf80Q9BSJ5 609 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 SPHKAPQ2M3C7 1700 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 CSTF3Q12996 717 aaKnown RBP18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 KIZQ2M2Z5 673 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 CEP78Q5JTW2 689 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 CYB5D1Q6P9G0 228 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 DDHD1Q8NEL9 900 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 TPCN2Q8NHX9 752 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 TFB1MQ8WVM0 346 aaKnown RBP18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 DNAJC7Q99615 494 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 DIABLOQ9NR28 239 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 CLK1P49759 484 aaKnown RBP18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 HIST2H2ACQ16777 129 aaPredicted RBP18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 HIST2H2AA3Q6FI13 130 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 NLRP9Q7RTR0 991 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 SNX31Q8N9S9 440 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 OPTNQ96CV9 577 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 PABPC3Q9H361 631 aaKnown RBP18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 ERAP1Q9NZ08 941 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 PPP1R3GB7ZBB8 358 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 SLC9A1P19634 815 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 RASA1P20936 1047 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 RFWD2Q8NHY2 731 aa18.11■□□□□ 0.49
HMGXB3-206ENST00000613459 SLCO1B7G3V0H7 640 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 AGAP9Q5VTM2 703 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 SLC7A5P2Q9GIP4 190 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 MARCOQ9UEW3 520 aaPredicted RBP18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 FKBP9O95302 570 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 RPLP2P05387 115 aaKnown RBP18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 GOLGA7BQ2TAP0 167 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 IL31Q6EBC2 164 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 FKBP9P1Q75LS8 142 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 P3H2Q8IVL5 708 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 ZNF507Q8TCN5 953 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 ILKAPQ9H0C8 392 aaPredicted RBP18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 CD248Q9HCU0 757 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 A0A0A6YYK5 440 aaPredicted RBP18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 SYNDIG1LA6NDD5 238 aa18.1■□□□□ 0.49
HMGXB3-206ENST00000613459 XPO1O14980 1071 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms