RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 CCDC157Q569K6 752 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 TRIQKQ629K1 86 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 RAB43Q86YS6 212 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 RNF135Q8IUD6 432 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 BBS5Q8N3I7 341 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 HDAC11Q96DB2 347 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 PPP1R2P1Q96PQ5 205 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 PLIN2Q99541 437 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 TRIM51Q9BSJ1 452 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 KCNK4Q9NYG8 393 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 AMACRQ9UHK6 382 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 INPP5FQ9Y2H2 1132 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 OVOS2A0A0J9YW53 1432 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 OVOS2Q6IE36 1432 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 SPDYE5A6NIY4 337 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 GRM8O00222 908 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 SNAP91O60641 907 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 GYS1P13807 737 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 RAG1P15918 1043 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 KRT25Q7Z3Z0 450 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 ANKMY2Q8IV38 441 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 KYQ8NBH2 561 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 GCOM2Q9BZD3 368 aaPredicted RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 EFCAB1Q9HAE3 211 aa5.15□□□□□ -1.58
VPS13D-213ENST00000613099 RYDENQ9NUL5 291 aaKnown RBP5.15□□□□□ -1.58
VPS13D-213ENST00000613099 STMND1H3BQB6 276 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TM9SF1O15321 606 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TAF5LO75529 589 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 MYO1DO94832 1006 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 GFPT1Q06210 699 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 DDB1Q16531 1140 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TSGA10IPQ3SY00 556 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PERM1Q5SV97 790 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TXNDC11Q6PKC3 985 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PIK3AP1Q6ZUJ8 805 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PIGWQ7Z7B1 504 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PALB2Q86YC2 1186 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 OR2W6PQ8NHA6 318 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TEX12Q9BXU0 123 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CABP1Q9NZU7 370 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CLDN25C9JDP6 229 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 SRGNP10124 158 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 GPC3P51654 580 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 MESDQ14696 234 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 BRDTQ58F21 947 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 NDUFAF2Q8N183 169 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PSPC1Q8WXF1 523 aaKnown RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PGBD4Q96DM1 585 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 INTS2Q9H0H0 1204 aaKnown RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PFASO15067 1338 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CCRL2O00421 344 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CAMTA2O94983 1202 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CD4P01730 458 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 UQCRFS1P1P0C7P4 283 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PIK3CAP42336 1068 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PRPSAP1Q14558 356 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TTC16Q8NEE8 873 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PROX1Q92786 737 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 METTL22Q9BUU2 404 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 POLR3BQ9NW08 1133 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 N4BP2Q86UW6 1770 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 A0A1W2PP64 1363 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 USP1O94782 785 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 ARHGEF16Q5VV41 709 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 ARL6IP4Q66PJ3 421 aaKnown RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 POMGNT1Q8WZA1 660 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 DDX50Q9BQ39 737 aaKnown RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CRNNQ9UBG3 495 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 BTBD18B2RXH4 712 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TSC22D2O75157 780 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CCDC81Q6ZN84 652 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CHST3Q7LGC8 479 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CCDC36Q8IYA8 594 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 HELQQ8TDG4 1101 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 NYXQ9GZU5 481 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TUBE1Q9UJT0 475 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 FAM25EA8MYX2 175 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TNFRSF10AO00220 468 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CLOCKO15516 846 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 ACAT1P24752 427 aaKnown RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 EXOSC10Q01780 885 aaKnown RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 MTERF2Q49AM1 385 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 ABRAXAS1Q6UWZ7 409 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 PLEKHM3Q6ZWE6 761 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 AMER2Q8N7J2 671 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 FAM13CQ8NE31 585 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 TNIP3Q96KP6 325 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 C17orf80Q9BSJ5 609 aa5.15□□□□□ -1.59
VPS13D-213ENST00000613099 CCDC177Q9NQR7 707 aaPredicted RBP5.15□□□□□ -1.59
VPS13D-213ENST00000613099 OR7A10O76100 309 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 PLIN5Q00G26 463 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ARL13BQ3SXY8 428 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 TMC3Q7Z5M5 1100 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 NARS2Q96I59 477 aaKnown RBP5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ZNF333Q96JL9 665 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 HHATLQ9HCP6 504 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ADAMTS1Q9UHI8 967 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 ADCY9O60503 1353 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 CLRN2A0PK11 232 aa5.14□□□□□ -1.59
VPS13D-213ENST00000613099 H7C0C1 242 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms