RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 SLC30A5Q8TAD4 765 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 LNX1Q8TBB1 728 aaPredicted RBP16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 PIK3R5Q8WYR1 880 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 TFAP2BQ92481 460 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 CCDC42Q96M95 316 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 PKMYT1Q99640 499 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 SYT15Q9BQS2 421 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 ZSWIM1Q9BR11 485 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 PBX4Q9BYU1 374 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 KCNF1Q9H3M0 494 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 DPEP3Q9H4B8 488 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 PCDHGC3Q9UN70 934 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 YBX2Q9Y2T7 364 aaKnown RBP16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 BACE2Q9Y5Z0 518 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 KIAA1671Q9BY89 1806 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 ARHGAP6O43182 974 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 MED7O43513 233 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 HCRTO43612 131 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 ARHGEF15O94989 841 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 CA3P07451 260 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 TNFAIP3P21580 790 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 FMO1Q01740 532 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 UBE3AQ05086 875 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 BMS1Q14692 1282 aaKnown RBP16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 SGO2Q562F6 1265 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 TDRD12Q587J7 1177 aaKnown RBP16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 INTS6LQ5JSJ4 861 aaKnown RBP16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 GPIHBP1Q8IV16 184 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 OR10T2Q8NGX3 314 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 SLC20A1Q8WUM9 679 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 ZCWPW1Q9H0M4 648 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 CRTAC1Q9NQ79 661 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 PUF60Q9UHX1 559 aaKnown RBP16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 MSRAQ9UJ68 235 aa16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 SPTBN5Q9NRC6 3674 aaKnown RBP16.97■□□□□ 0.31
CLTCL1-207ENST00000611723 MYO9BQ13459 2157 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 TSC2P49815 1807 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 O00370 1275 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 DDX3XO00571 662 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 THAP12O43422 761 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 LILRB3O75022 631 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 ATP2C2O75185 946 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 LCA5LO95447 670 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 CALCAP01258 141 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 CD19P15391 556 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 ACAT1P24752 427 aaKnown RBP16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 BRD2P25440 801 aaKnown RBP16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 CTNNB1P35222 781 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 PBX2P40425 430 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 TSPY1Q01534 308 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 TAP1Q03518 808 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 ORC1Q13415 861 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 MAPRE1Q15691 268 aaKnown RBP16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 CTXN3Q4LDR2 81 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 ZNF280DQ6N043 979 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 LCLAT1Q6UWP7 414 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 TRIM72Q6ZMU5 477 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 VPS36Q86VN1 386 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 VPS52Q8N1B4 723 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 C12orf29Q8N999 325 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 MYCBPAPQ8TBZ2 947 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 SPPL3Q8TCT6 385 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 ZNF830Q96NB3 372 aaPredicted RBP16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 HNRNPABQ99729 332 aaKnown RBP16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 C17orf80Q9BSJ5 609 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 LHX5Q9H2C1 402 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 MTRRQ9UBK8 725 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 SSX2IPQ9Y2D8 614 aa16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 EPN1Q9Y6I3 576 aaPredicted RBP16.96■□□□□ 0.31
CLTCL1-207ENST00000611723 MYBPHLA2RUH7 354 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 SOWAHDA6NJG2 315 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 CYP1A1P04798 512 aaPredicted RBP16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 MMEP08473 750 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 CTSAP10619 480 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 CDH5P33151 784 aaPredicted RBP16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 CYLC1P35663 651 aaPredicted RBP16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 GLUD2P49448 558 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 SMARCB1Q12824 385 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 SLC18A3Q16572 532 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 PPP1R26Q5T8A7 1209 aaPredicted RBP16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 KIAA1841Q6NSI8 718 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 RAD9BQ6WBX8 426 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 LRRTM3Q86VH5 581 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 DCP1BQ8IZD4 617 aaKnown RBP16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 RIN2Q8WYP3 895 aaPredicted RBP16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 CYFIP2Q96F07 1278 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 B3GALT6Q96L58 329 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 PCDHB18PQ96TA0 734 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 ZBP1Q9H171 429 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 ADAMTS1Q9UHI8 967 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 NENFQ9UMX5 172 aa16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLTCL1-207ENST00000611723 EIF3CLB5ME19 914 aaKnown RBP16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 AKR1B10O60218 316 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 GZMAP12544 262 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 DNAJB2P25686 324 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 KIF11P52732 1056 aa16.94■□□□□ 0.3
CLTCL1-207ENST00000611723 PSMC1P62191 440 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms