RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 SIX5Q8N196 739 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 RIN3Q8TB24 985 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 PI4K2AQ9BTU6 479 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 DPEP3Q9H4B8 488 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 KIAA1586Q9HCI6 787 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 CRTAC1Q9NQ79 661 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 AVENQ9NQS1 362 aaPredicted RBP9.3□□□□□ -0.92
SNCA-212ENST00000611107 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■■■■■ 149.1
SNCA-212ENST00000611107 GDAP2Q9NXN4 497 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.3□□□□□ -0.92
SNCA-212ENST00000611107 ITGA11Q9UKX5 1188 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 MRPS23Q9Y3D9 190 aaKnown RBP9.3□□□□□ -0.92
SNCA-212ENST00000611107 MTF2Q9Y483 593 aaPredicted RBP9.3□□□□□ -0.92
SNCA-212ENST00000611107 SNX9Q9Y5X1 595 aa9.3□□□□□ -0.92
SNCA-212ENST00000611107 A0A1W2PRU2 124 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 SLC16A3O15427 465 aaKnown RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 TADA3O75528 432 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 C4BPAP04003 597 aaKnown RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 TMEM191BP0C7N4 346 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 TRIM49P0CI25 452 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 TRIM49CP0CI26 452 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 HAPLN1P10915 354 aaPredicted RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 HMGA1P17096 107 aaKnown RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 PTMSP20962 102 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 CD72P21854 359 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 CYP2F1P24903 491 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 CDH8P55286 799 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 STX17P56962 302 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 PSMC1P62191 440 aaKnown RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 CLDN10P78369 228 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 RBP5P82980 135 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 CYP4F8P98187 520 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 ADAM9Q13443 819 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 GRM2Q14416 872 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 NFKBIBQ15653 356 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 DDR2Q16832 855 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 SV2CQ496J9 727 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 WDR44Q5JSH3 913 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 SPOPLQ6IQ16 392 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 C11orf57Q6ZUT1 292 aaPredicted RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 DNAJB7Q7Z6W7 309 aaPredicted RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 FAM186BQ8IYM0 893 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 UBALD2Q8IYN6 164 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 LRRC52Q8N7C0 313 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 PARD3BQ8TEW8 1205 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 HPDLQ96IR7 371 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 SEPT5Q99719 369 aaPredicted RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 TSG101Q99816 390 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 FOXQ1Q9C009 403 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 SMG9Q9H0W8 520 aaKnown RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 FAM86C1Q9NVL1 165 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 DDX43Q9NXZ2 648 aaKnown RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 ABI2Q9NYB9 513 aaPredicted RBP9.29□□□□□ -0.92
SNCA-212ENST00000611107 IGSF9Q9P2J2 1179 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 DPP7Q9UHL4 492 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 GTF3C4Q9UKN8 822 aa9.29□□□□□ -0.92
SNCA-212ENST00000611107 BICDL2A1A5D9 508 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 PRAMEF12O95522 483 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 PDGFRBP09619 1106 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 SRFP11831 508 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 RPL13P26373 211 aaKnown RBP9.28□□□□□ -0.92
SNCA-212ENST00000611107 HOXC13P31276 330 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
SNCA-212ENST00000611107 FKBP3Q00688 224 aaKnown RBP9.28□□□□□ -0.92
SNCA-212ENST00000611107 TYRO3Q06418 890 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 PPP3CAQ08209 521 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 ORC1Q13415 861 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 SURF1Q15526 300 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 STX1AQ16623 288 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 DUOXA2Q1HG44 320 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 INTS6LQ5JSJ4 861 aaKnown RBP9.28□□□□□ -0.92
SNCA-212ENST00000611107 FAM171BQ6P995 826 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 VITQ6UXI7 678 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 INTS8Q75QN2 995 aaKnown RBP9.28□□□□□ -0.92
SNCA-212ENST00000611107 ADGRF2Q8IZF7 708 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 MLKLQ8NB16 471 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 FLCNQ8NFG4 579 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 CACTINQ8WUQ7 758 aaKnown RBP9.28□□□□□ -0.92
SNCA-212ENST00000611107 SYAP1Q96A49 352 aaPredicted RBP9.28□□□□□ -0.92
SNCA-212ENST00000611107 ANKRD36BP1Q96IX9 119 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 ZNF560Q96MR9 790 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 ASB16Q96NS5 453 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 FUCA2Q9BTY2 467 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 SMYD3Q9H7B4 428 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 HMGXB4Q9UGU5 601 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 RWDD2AQ9UIY3 292 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 FRMD4BQ9Y2L6 1034 aa9.28□□□□□ -0.92
SNCA-212ENST00000611107 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.28□□□□□ -0.92
SNCA-212ENST00000611107 FANCMQ8IYD8 2048 aa9.27□□□□□ -0.92
SNCA-212ENST00000611107 DMDP11532 3685 aa9.27□□□□□ -0.93
SNCA-212ENST00000611107 SYCE3A1L190 88 aa9.27□□□□□ -0.93
SNCA-212ENST00000611107 CLDN5O00501 218 aa9.27□□□□□ -0.93
SNCA-212ENST00000611107 CETN3O15182 167 aa9.27□□□□□ -0.93
SNCA-212ENST00000611107 HUS1O60921 280 aa9.27□□□□□ -0.93
SNCA-212ENST00000611107 TNNC2P02585 160 aa9.27□□□□□ -0.93
SNCA-212ENST00000611107 F11P03951 625 aa9.27□□□□□ -0.93
SNCA-212ENST00000611107 DCNP07585 359 aaKnown RBP9.27□□□□□ -0.93
SNCA-212ENST00000611107 EPB41P11171 864 aaKnown RBP9.27□□□□□ -0.93
SNCA-212ENST00000611107 TNNI1P19237 187 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms