RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 GCOM2Q9BZD3 368 aaPredicted RBP29.6■■■□□ 2.33
CSPG5-205ENST00000610462 BARX2Q9UMQ3 279 aaPredicted RBP29.6■■■□□ 2.33
CSPG5-205ENST00000610462 RIPK2O43353 540 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 PSMA2P25787 234 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 GUCY1A3Q02108 690 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 TRIP13Q15645 432 aaPredicted RBP29.6■■■□□ 2.33
CSPG5-205ENST00000610462 CNGA2Q16280 664 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 TTC39CQ8N584 583 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 JOSD2Q8TAC2 188 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 FAM118BQ9BPY3 351 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 CPA4Q9UI42 421 aa29.6■■■□□ 2.33
CSPG5-205ENST00000610462 NPTXRO95502 500 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 KRT10P13645 584 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 IRF5Q13568 498 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 ODF2Q5BJF6 829 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 MORN1Q5T089 497 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 TXNRD3NBQ6F5E7 133 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 TRMT10CQ7L0Y3 403 aaKnown RBP29.59■■■□□ 2.33
CSPG5-205ENST00000610462 POLNQ7Z5Q5 900 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 TLCD1Q96CP7 247 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 FAM49AQ9H0Q0 323 aaPredicted RBP29.59■■■□□ 2.33
CSPG5-205ENST00000610462 SYNCQ9H7C4 482 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 PLEKHA5Q9HAU0 1116 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 GNEQ9Y223 722 aaKnown RBP29.59■■■□□ 2.33
CSPG5-205ENST00000610462 NRCAMQ92823 1304 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 GPR32O75388 356 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 F2P00734 622 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 HMGCRP04035 888 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 ERBB2P04626 1255 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 SMIM10L2AP0DMW4 78 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 SMIM10L2BP0DMW5 78 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 ATF7P17544 494 aaPredicted RBP29.59■■■□□ 2.33
CSPG5-205ENST00000610462 ADCY8P40145 1251 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 GABRB2P47870 512 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 ITGA8P53708 1063 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 LMNB2Q03252 620 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 ADCY2Q08462 1091 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 PRAMEF19Q5SWL8 479 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 KAZNQ674X7 775 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 ZNF365Q70YC5 407 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 CROCCP2Q86T23 111 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 HEXIM2Q96MH2 286 aaKnown RBP29.59■■■□□ 2.33
CSPG5-205ENST00000610462 TMEM109Q9BVC6 243 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 TSPYL1Q9H0U9 437 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 AAASQ9NRG9 546 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 DERAQ9Y315 318 aa29.59■■■□□ 2.33
CSPG5-205ENST00000610462 DOCK3Q8IZD9 2030 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 CAND2O75155 1236 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 HOXA11P31270 313 aaPredicted RBP29.58■■■□□ 2.33
CSPG5-205ENST00000610462 PPP2R2AP63151 447 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 TMEM62Q0P6H9 643 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 MAP2K5Q13163 448 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 DRICH1Q6PGQ1 229 aaPredicted RBP29.58■■■□□ 2.33
CSPG5-205ENST00000610462 CCDC25Q86WR0 208 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 CCDC89Q8N998 374 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 BCAS4Q8TDM0 211 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 RAPGEF5Q92565 580 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 TRAIPQ9BWF2 469 aa29.58■■■□□ 2.33
CSPG5-205ENST00000610462 M0QYV0 167 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 LIASO43766 372 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 LSP1P33241 339 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 MAGOHP61326 146 aaKnown RBP29.57■■■□□ 2.32
CSPG5-205ENST00000610462 SLC27A1Q6PCB7 646 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 CATSPER4Q7RTX7 472 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 BBOF1Q8ND07 529 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 ANAPC5Q9UJX4 755 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 hCG_1818297A0A087WSY0 165 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 SMIM35A0A1B0GVV1 85 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 GPD2P43304 727 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 NDST1P52848 882 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 SKIDA1Q1XH10 827 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 TFDP3Q5H9I0 405 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 UBAP2Q5T6F2 1119 aaKnown RBP29.57■■■□□ 2.32
CSPG5-205ENST00000610462 KAT2BQ92831 832 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 PGM2Q96G03 612 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 METTL5Q9NRN9 209 aaKnown RBP29.57■■■□□ 2.32
CSPG5-205ENST00000610462 KIAA1257Q9ULG3 409 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 GINS2Q9Y248 185 aa29.57■■■□□ 2.32
CSPG5-205ENST00000610462 MCRS1Q96EZ8 462 aa29.56■■■□□ 2.32
CSPG5-205ENST00000610462 SLC12A6Q9UHW9 1150 aa29.56■■■□□ 2.32
CSPG5-205ENST00000610462 MBLAC1A4D2B0 266 aaPredicted RBP29.56■■■□□ 2.32
CSPG5-205ENST00000610462 CDKN2BP42772 138 aa29.56■■■□□ 2.32
CSPG5-205ENST00000610462 SLC25A11Q02978 314 aaKnown RBP29.56■■■□□ 2.32
CSPG5-205ENST00000610462 MYO1EQ12965 1108 aa29.56■■■□□ 2.32
CSPG5-205ENST00000610462 BYSLQ13895 437 aaKnown RBP29.56■■■□□ 2.32
CSPG5-205ENST00000610462 RRAGCQ9HB90 399 aa29.56■■■□□ 2.32
CSPG5-205ENST00000610462 CDHR5Q9HBB8 845 aa29.56■■■□□ 2.32
CSPG5-205ENST00000610462 SNTG2Q9NY99 539 aa29.56■■■□□ 2.32
CSPG5-205ENST00000610462 LRRD1A4D1F6 860 aa29.55■■■□□ 2.32
CSPG5-205ENST00000610462 DCDC2CA8MYV0 355 aa29.55■■■□□ 2.32
CSPG5-205ENST00000610462 LRCH4O75427 683 aa29.55■■■□□ 2.32
CSPG5-205ENST00000610462 ITGBL1O95965 494 aaPredicted RBP29.55■■■□□ 2.32
CSPG5-205ENST00000610462 KLRC2P26717 231 aa29.55■■■□□ 2.32
CSPG5-205ENST00000610462 CHKAP35790 457 aa29.55■■■□□ 2.32
CSPG5-205ENST00000610462 PCBP1Q15365 356 aaKnown RBP eCLIP29.55■■■□□ 2.32
CSPG5-205ENST00000610462 ARFGAP1Q8N6T3 406 aa29.55■■■□□ 2.32
CSPG5-205ENST00000610462 ACSF2Q96CM8 615 aaPredicted RBP29.55■■■□□ 2.32
CSPG5-205ENST00000610462 SNX27Q96L92 541 aa29.55■■■□□ 2.32
CSPG5-205ENST00000610462 CDC42EP4Q9H3Q1 356 aaKnown RBP29.55■■■□□ 2.32
CSPG5-205ENST00000610462 SCN1AP35498 2009 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms