RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 YIPF1Q9Y548 306 aa24.62■■□□□ 1.53
SNX5-217ENST00000606557 MYBPHLA2RUH7 354 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 CCL16O15467 120 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 EEF1GP26641 437 aaKnown RBP24.61■■□□□ 1.53
SNX5-217ENST00000606557 INCA1Q0VD86 236 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 CETN1Q12798 172 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 MAN2A1Q16706 1144 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 ZSCAN23Q3MJ62 389 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 ATAT1Q5SQI0 421 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 NECTIN4Q96NY8 510 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 BPIFA3Q9BQP9 254 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 NAT10Q9H0A0 1025 aaKnown RBP24.61■■□□□ 1.53
SNX5-217ENST00000606557 DPEP3Q9H4B8 488 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 ABI2Q9NYB9 513 aaPredicted RBP24.61■■□□□ 1.53
SNX5-217ENST00000606557 SLC27A5Q9Y2P5 690 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 PCDHB5Q9Y5E4 795 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 MYH10P35580 1976 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 GREB1Q4ZG55 1949 aa24.61■■□□□ 1.53
SNX5-217ENST00000606557 DOCK8Q8NF50 2099 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 LRG1P02750 347 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 NCAPHQ15003 741 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 TCP11X2Q5H9J9 407 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 ARID3AQ99856 593 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 TUBGCP2Q9BSJ2 902 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 POMKQ9H5K3 350 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 FANCLQ9NW38 375 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 HMGXB4Q9UGU5 601 aa24.6■■□□□ 1.53
SNX5-217ENST00000606557 XYLBO75191 536 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 NDST1P52848 882 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 TWF1Q12792 350 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 MIIPQ5JXC2 388 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 UNC93AQ86WB7 457 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 AOPEPQ8N6M6 819 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 B3GALNT2Q8NCR0 500 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 EHBP1Q8NDI1 1231 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 MYCBPAPQ8TBZ2 947 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 MYLPFQ96A32 169 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 PIDD1Q9HB75 910 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 ABCB6Q9NP58 842 aa24.59■■□□□ 1.53
SNX5-217ENST00000606557 VCANP13611 3396 aa24.58■■□□□ 1.53
SNX5-217ENST00000606557 PRKCSHP14314 528 aaPredicted RBP24.58■■□□□ 1.53
SNX5-217ENST00000606557 PTPN1P18031 435 aaKnown RBP24.58■■□□□ 1.53
SNX5-217ENST00000606557 LRMPQ12912 555 aa24.58■■□□□ 1.53
SNX5-217ENST00000606557 MAPRE1Q15691 268 aaKnown RBP24.58■■□□□ 1.53
SNX5-217ENST00000606557 MDH1BQ5I0G3 518 aa24.58■■□□□ 1.53
SNX5-217ENST00000606557 NT5C1BQ96P26 610 aa24.58■■□□□ 1.53
SNX5-217ENST00000606557 LPIN3Q9BQK8 851 aa24.58■■□□□ 1.53
SNX5-217ENST00000606557 INTS2Q9H0H0 1204 aaKnown RBP24.58■■□□□ 1.53
SNX5-217ENST00000606557 GCNT4Q9P109 453 aa24.58■■□□□ 1.53
SNX5-217ENST00000606557 CILPO75339 1184 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 SOAT2O75908 522 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 HAPLN1P10915 354 aaPredicted RBP24.57■■□□□ 1.52
SNX5-217ENST00000606557 CD58P19256 250 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 TUFMP49411 452 aaKnown RBP24.57■■□□□ 1.52
SNX5-217ENST00000606557 PLD1Q13393 1074 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 CUL2Q13617 745 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 MGAT5BQ3V5L5 792 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 CFAP221Q4G0U5 840 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 VWA3BQ502W6 1294 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 C4orf50Q6ZRC1 276 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 SPATA2LQ8IUW3 424 aaPredicted RBP24.57■■□□□ 1.52
SNX5-217ENST00000606557 DHX40Q8IX18 779 aaKnown RBP24.57■■□□□ 1.52
SNX5-217ENST00000606557 PCED1BQ96HM7 432 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 FUBP3Q96I24 572 aaKnown RBP eCLIP24.57■■□□□ 1.52
SNX5-217ENST00000606557 TNIP3Q96KP6 325 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 TWNKQ96RR1 684 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 SEPT5Q99719 369 aaPredicted RBP24.57■■□□□ 1.52
SNX5-217ENST00000606557 HSD3B7Q9H2F3 369 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 NDST4Q9H3R1 872 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 FAM124BQ9H5Z6 455 aaPredicted RBP24.57■■□□□ 1.52
SNX5-217ENST00000606557 WDR6Q9NNW5 1121 aaKnown RBP24.57■■□□□ 1.52
SNX5-217ENST00000606557 CEP72Q9P209 647 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 PRKAG3Q9UGI9 489 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 OBSL1O75147 1896 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 CLUHO75153 1309 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 DENND4CQ5VZ89 1909 aa24.57■■□□□ 1.52
SNX5-217ENST00000606557 PATJQ8NI35 1801 aa24.56■■□□□ 1.52
SNX5-217ENST00000606557 GTPBP10A4D1E9 387 aaKnown RBP24.56■■□□□ 1.52
SNX5-217ENST00000606557 ATF6P18850 670 aa24.56■■□□□ 1.52
SNX5-217ENST00000606557 ALDH1A3P47895 512 aa24.56■■□□□ 1.52
SNX5-217ENST00000606557 ORC1Q13415 861 aa24.56■■□□□ 1.52
SNX5-217ENST00000606557 GRASPQ7Z6J2 395 aaPredicted RBP24.56■■□□□ 1.52
SNX5-217ENST00000606557 ACOT1Q86TX2 421 aa24.56■■□□□ 1.52
SNX5-217ENST00000606557 WHAMMQ8TF30 809 aa24.56■■□□□ 1.52
SNX5-217ENST00000606557 PHF7Q9BWX1 381 aaPredicted RBP24.56■■□□□ 1.52
SNX5-217ENST00000606557 CISHQ9NSE2 258 aa24.56■■□□□ 1.52
SNX5-217ENST00000606557 HCFC1R1Q9NWW0 138 aa24.56■■□□□ 1.52
SNX5-217ENST00000606557 ZNF638Q14966 1978 aaKnown RBP24.56■■□□□ 1.52
SNX5-217ENST00000606557 ZNF18P17022 549 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 TBXAS1P24557 533 aaPredicted RBP24.55■■□□□ 1.52
SNX5-217ENST00000606557 CYP2F1P24903 491 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 ZNF165P49910 485 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 CYP27A1Q02318 531 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 KRT31Q15323 416 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 GBP6Q6ZN66 633 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 ADHFE1Q8IWW8 467 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 CRYBG2Q8N1P7 616 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 ELMOD1Q8N336 334 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 TTC39CQ8N584 583 aa24.55■■□□□ 1.52
SNX5-217ENST00000606557 UBR7Q8N806 425 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms