RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KIF11P52732 1056 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ERVFRD-1P60508 538 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 GRIN1Q05586 938 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 RNASELQ05823 741 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLC34A1Q06495 639 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 MCL1Q07820 350 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 AP1B1Q10567 949 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TEFQ10587 303 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 CBX3Q13185 183 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 HNRNPDQ14103 355 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 GIT2Q14161 759 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 BCL2A1Q16548 175 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 KRT71Q3SY84 523 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF568Q3ZCX4 644 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SPATS1Q496A3 300 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 HSF5Q4G112 596 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM133BQ5BKY9 247 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 AKNAD1Q5T1N1 836 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ARMC3Q5W041 872 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ARL6IP4Q66PJ3 421 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TTI2Q6NXR4 508 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 APOA5Q6Q788 366 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZPBP2Q6X784 338 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 DDX46Q7L014 1031 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TAOK1Q7L7X3 1001 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 REC114Q7Z4M0 266 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLFN11Q7Z7L1 901 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ADGRG6Q86SQ4 1221 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF554Q86TJ5 538 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMEM110Q86TL2 294 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM129CQ86XR2 697 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 CROCCP3Q8IVE0 287 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 MYOCDQ8IZQ8 938 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SYCP3Q8IZU3 236 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SAMD3Q8N6K7 520 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 FITM2Q8N6M3 262 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 LINC01356Q8N9X3 169 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 GIMAP8Q8ND71 665 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 WDR66Q8TBY9 1149 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF398Q8TD17 642 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 DYDC1Q8WWB3 177 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ANKS1AQ92625 1134 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 DGCR14Q96DF8 476 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 EAF1Q96JC9 268 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMEM74Q96NL1 305 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TUBGCP5Q96RT8 1024 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 KRT12Q99456 494 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 CENPKQ9BS16 269 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TUBGCP2Q9BSJ2 902 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 UBAC1Q9BSL1 405 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 POLR3CQ9BUI4 534 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 PUS3Q9BZE2 481 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 DDX47Q9H0S4 455 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 NRDE2Q9H7Z3 1164 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 RMI1Q9H9A7 625 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 C17orf75Q9HAS0 396 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAGEF1Q9HAY2 307 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 CHST7Q9NS84 486 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 GJB4Q9NTQ9 266 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 AGPAT5Q9NUQ2 364 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 RNF19AQ9NV58 838 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 PAG1Q9NWQ8 432 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZDHHC7Q9NXF8 308 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 EHD2Q9NZN4 543 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 STX18Q9P2W9 335 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 INTUQ9ULD6 942 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SYNPO2Q9UMS6 1093 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SIK3Q9Y2K2 1263 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 POLR3KQ9Y2Y1 108 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 PRR36Q9H6K5 1346 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 FLT4P35916 1363 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TECPR2O15040 1411 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 LMTK3Q96Q04 1460 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 SLIT3O75094 1523 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 USP54Q70EL1 1684 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 RIMBP3CA6NJZ7 1639 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 RIMBP3BA6NNM3 1639 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 RIMBP3Q9UFD9 1639 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MAST3O60307 1309 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 XDHP47989 1333 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PASKQ96RG2 1323 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PCDH11XQ9BZA7 1347 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 A0A087X0B3 334 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 A0A0A6YYK5 440 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 KANSL1LA0AUZ9 987 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 TMEM82A0PJX8 343 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MACROD2A1Z1Q3 448 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 TMEM247A6NEH6 219 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 NOTOA8MTQ0 251 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 A8MXQ7 604 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 F8W8V4 182 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 IRS4O14654 1257 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZNF213O14771 459 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PSMA7O14818 248 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CETN3O15182 167 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MAPK13O15264 365 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZBTB43O43298 467 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 SIGLEC6O43699 453 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 KLRC4O43908 158 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms