RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ATP6V1DQ9Y5K8 247 aa11.45□□□□□ -0.58
TUBE1-210ENST00000604967 HUS1O60921 280 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 TNNC2P02585 160 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 F11P03951 625 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 TRIM49P0CI25 452 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 TRIM49CP0CI26 452 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
TUBE1-210ENST00000604967 TNNI1P19237 187 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 AOC1P19801 751 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 CD72P21854 359 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 WARSP23381 471 aaKnown RBP11.44□□□□□ -0.58
TUBE1-210ENST00000604967 USP46P62068 366 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 NUCB2P80303 420 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 PPP3CAQ08209 521 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 PLD1Q13393 1074 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 FZD5Q13467 585 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 SURF1Q15526 300 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 MGAT5BQ3V5L5 792 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 SPOPLQ6IQ16 392 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 METTL23Q86XA0 190 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
TUBE1-210ENST00000604967 THEM5Q8N1Q8 247 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 TMEM86AQ8N2M4 240 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 GUF1Q8N442 669 aaKnown RBP11.44□□□□□ -0.58
TUBE1-210ENST00000604967 ZSCAN18Q8TBC5 510 aaPredicted RBP11.44□□□□□ -0.58
TUBE1-210ENST00000604967 SLC46A2Q9BY10 475 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 TBC1D17Q9HA65 648 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.44□□□□□ -0.58
TUBE1-210ENST00000604967 ARHGEF3Q9NR81 526 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 CGNQ9P2M7 1197 aaKnown RBP11.44□□□□□ -0.58
TUBE1-210ENST00000604967 HMGXB4Q9UGU5 601 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 FBXL21Q9UKT6 434 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 PCDHA5Q9Y5H7 936 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 WDR87Q6ZQQ6 2873 aa11.44□□□□□ -0.58
TUBE1-210ENST00000604967 PTPRDP23468 1912 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 OBSL1O75147 1896 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 STAU1O95793 577 aaKnown RBP11.43□□□□□ -0.58
TUBE1-210ENST00000604967 GABRR2P28476 465 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 PRCPP42785 496 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 ALDH1A3P47895 512 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 CLCN5P51795 746 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 EPHB3P54753 998 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 STARD6P59095 220 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 WDR72Q3MJ13 1102 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 ZACNQ401N2 412 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 CYP4A22Q5TCH4 519 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 IQCEQ6IPM2 695 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 PAQR9Q6ZVX9 377 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 MTSS1LQ765P7 747 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 SV2AQ7L0J3 742 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 SPPL2BQ8TCT7 592 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 SMARCD2Q92925 531 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 MYLPFQ96A32 169 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 ELSPBP1Q96BH3 223 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 CHFRQ96EP1 664 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 FNBP1Q96RU3 617 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 SLC22A12Q96S37 553 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 SYT15Q9BQS2 421 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 VRTNQ9H8Y1 702 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 APOBEC3GQ9HC16 384 aaKnown RBP11.43□□□□□ -0.58
TUBE1-210ENST00000604967 HEBP1Q9NRV9 189 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 CCL26Q9Y258 94 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 PCDHB5Q9Y5E4 795 aa11.43□□□□□ -0.58
TUBE1-210ENST00000604967 TRIM49BA6NDI0 452 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 HEPACAM2A8MVW5 462 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 H0Y858 1186 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 CLDN5O00501 218 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 ZNF197O14709 1029 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
TUBE1-210ENST00000604967 PRPF40AO75400 957 aaKnown RBP11.42□□□□□ -0.58
TUBE1-210ENST00000604967 TACC1O75410 805 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 DCNP07585 359 aaKnown RBP11.42□□□□□ -0.58
TUBE1-210ENST00000604967 NR2F2P24468 414 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 TUFMP49411 452 aaKnown RBP11.42□□□□□ -0.58
TUBE1-210ENST00000604967 NLRP12P59046 1061 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 FAM160A1Q05DH4 1040 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 MYO1EQ12965 1108 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 ORC1Q13415 861 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 NCOA4Q13772 614 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 NFIL3Q16649 462 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 SLC44A4Q53GD3 710 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 CEP135Q66GS9 1140 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 ISM2Q6H9L7 571 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 DPH6Q7L8W6 267 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 ARID3BQ8IVW6 561 aaPredicted RBP11.42□□□□□ -0.58
TUBE1-210ENST00000604967 ZC3H3Q8IXZ2 948 aaKnown RBP11.42□□□□□ -0.58
TUBE1-210ENST00000604967 CCDC105Q8IYK2 499 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 DCP1BQ8IZD4 617 aaKnown RBP11.42□□□□□ -0.58
TUBE1-210ENST00000604967 MAML2Q8IZL2 1156 aaPredicted RBP11.42□□□□□ -0.58
TUBE1-210ENST00000604967 GOLGA5Q8TBA6 731 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 TAS1R2Q8TE23 839 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 SEMA4DQ92854 862 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 FAM122AQ96E09 287 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 PCED1BQ96HM7 432 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 ZFYVE19Q96K21 471 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 TWNKQ96RR1 684 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 MMS19Q96T76 1030 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 B3GNT5Q9BYG0 378 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 ATXN3LQ9H3M9 355 aa11.42□□□□□ -0.58
TUBE1-210ENST00000604967 NXF1Q9UBU9 619 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms