RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 METTL16Q86W50 562 aaKnown RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 URGCPQ8TCY9 931 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ASIC4Q96FT7 647 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 CCSER1Q9C0I3 900 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 PARVAQ9NVD7 372 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SCN3BQ9NY72 215 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SESN2P58004 480 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF235Q14590 738 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ZFRQ96KR1 1074 aaKnown RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF184Q99676 751 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SPON2Q9BUD6 331 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 CCDC189A1A4V9 331 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 CBX3Q13185 183 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 TAF5Q15542 800 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 STXBP2Q15833 593 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ADRM1Q16186 407 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 C6orf10Q5SRN2 563 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SWSAP1Q6NVH7 229 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SLC30A5Q8TAD4 765 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 HPS1Q92902 700 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SLC10A4Q96EP9 437 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 HDHD2Q9H0R4 259 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ECE2O60344 883 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 CDH3P22223 829 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 POLD3Q15054 466 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 RMDN1Q96DB5 314 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 RMND5BQ96G75 393 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 MAGEB18Q96M61 343 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ANKRD27Q96NW4 1050 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 PLEKHG4BQ96PX9 1271 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 CITED4Q96RK1 184 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 JPH1Q9HDC5 661 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 KRT36O76013 467 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TDP2O95551 362 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 FGFR3P22607 806 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TC2NQ8N9U0 490 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 KIF12Q96FN5 646 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 RNF146Q9NTX7 359 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TBC1D22BQ9NU19 505 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TRNAU1APQ9NX07 287 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 CYP26A1O43174 497 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 ATMINO43313 823 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TRIM13O60858 407 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 GGPS1O95749 300 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SOX6P35712 828 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SHC4Q6S5L8 630 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 MMGT1Q8N4V1 131 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SENP1Q9P0U3 644 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 BAIAP3O94812 1187 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 CDH2P19022 906 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 USP4Q13107 963 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 UXS1Q8NBZ7 420 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 CPA5Q8WXQ8 436 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 CHID1Q9BWS9 393 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 ENTPD7Q9NQZ7 604 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 CHKBQ9Y259 395 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 EZH2Q15910 746 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 CLEC17AQ6ZS10 378 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 NSUN6Q8TEA1 469 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 MCEEQ96PE7 176 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 WRNIP1Q96S55 665 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SENP7Q9BQF6 1050 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 RXFP1Q9HBX9 757 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 MRPL39Q9NYK5 338 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PFASO15067 1338 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 A0A1B0GTH6 734 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SARSP49591 514 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 NME5P56597 212 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 MCL1Q07820 350 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 ARHGEF6Q15052 776 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 CIAPIN1Q6FI81 312 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TNIP2Q8NFZ5 429 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 OTUB1Q96FW1 271 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PCDH12Q9NPG4 1184 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 MROH7-TTC4A0A0A0MT08 1334 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PIPSLA2A3N6 862 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SPDYE5A6NIY4 337 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 ALOX15P16050 662 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF23P17027 643 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PSMA4P25789 261 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 QRICH1Q2TAL8 776 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SPDYE7PQ495Y7 208 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PRR23CQ6ZRP0 262 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 L2HGDHQ9H9P8 463 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 FANCEQ9HB96 536 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PVALEFA0A1B0GWK0 134 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PSMD14O00487 310 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 STX7O15400 261 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 CBX6O95503 412 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 GUCY1A2P33402 732 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 C19orf18Q8NEA5 215 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TMEM120AQ9BXJ8 343 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 UBE2OQ9C0C9 1292 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 RAD23AP54725 363 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 SPDYAQ5MJ70 313 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 THOC7Q6I9Y2 204 aaKnown RBP9.05□□□□□ -0.96
CSMD1-216ENST00000602557 ENKURQ8TC29 256 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 PPP2R3CQ969Q6 453 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 ZSCAN32Q9NX65 697 aa9.05□□□□□ -0.96
CSMD1-216ENST00000602557 TUBA8Q9NY65 449 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms