RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	NEUROG3	Q9Y4Z2	214 aa		19.96	■□□□□ 0.79
LTBP4-231	ENST00000602251	ASCC3	Q8N3C0	2202 aa	Known RBP	19.96	■□□□□ 0.79
LTBP4-231	ENST00000602251	NUP205	Q92621	2012 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	PATE3	B3GLJ2	98 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	ARSA	P15289	507 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	TYMP	P19971	482 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	IRX4	P78413	519 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	DMP1	Q13316	513 aa	Predicted RBP	19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	DMC1	Q14565	340 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	SLC39A14	Q15043	492 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	PMS2CL	Q68D20	193 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	KIAA1211L	Q6NV74	962 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	ARMCX5	Q6P1M9	558 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	FOXD4L3	Q6VB84	417 aa	Predicted RBP	19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	EZH1	Q92800	747 aa	Predicted RBP	19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	USP13	Q92995	863 aa	Predicted RBP	19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	PNMA5	Q96PV4	448 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	GCNA	Q96QF7	691 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	P2RY13	Q9BPV8	354 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	TFIP11	Q9UBB9	837 aa	Known RBP	19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	CCDC39	Q9UFE4	941 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	TBX20	Q9UMR3	447 aa		19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	SRPRB	Q9Y5M8	271 aa	Known RBP	19.95	■□□□□ 0.78
LTBP4-231	ENST00000602251	TAF4	O00268	1085 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	HYAL3	O43820	417 aa	Predicted RBP	19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	HIP1R	O75146	1068 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	TOM1L1	O75674	476 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	CXCL8	P10145	99 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	ATF6	P18850	670 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	TUFM	P49411	452 aa	Known RBP	19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	DGKE	P52429	567 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	GRIN1	Q05586	938 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	NOLC1	Q14978	699 aa	Known RBP eCLIP	19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	VEPH1	Q14D04	833 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	UAP1L1	Q3KQV9	507 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	KCNK18	Q7Z418	384 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	KRI1	Q8N9T8	703 aa	Known RBP	19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	KIF12	Q96FN5	646 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	DRC1	Q96MC2	740 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	SEPT5	Q99719	369 aa	Predicted RBP	19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	PLEKHA5	Q9HAU0	1116 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	ANKFY1	Q9P2R3	1169 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	ZMYM5	Q9UJ78	669 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	FBXO2	Q9UK22	296 aa	Predicted RBP	19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	MSRB2	Q9Y3D2	182 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	PCNX2	A6NKB5	2137 aa		19.94	■□□□□ 0.78
LTBP4-231	ENST00000602251	TTC26	A0AVF1	554 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	PLA2G4B	P0C869	781 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	CYP3A5	P20815	502 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	GJA4	P35212	333 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	AVPR1A	P37288	418 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	TMEM119	Q4V9L6	283 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	USP39	Q53GS9	565 aa	Known RBP	19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	RINT1	Q6NUQ1	792 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	TMEM150A	Q86TG1	271 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	C11orf74	Q86VG3	221 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	SYT2	Q8N9I0	419 aa	Predicted RBP	19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	RIN3	Q8TB24	985 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	TIPIN	Q9BVW5	301 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	TDP1	Q9NUW8	608 aa		19.93	■□□□□ 0.78
LTBP4-231	ENST00000602251	SPTLC2	O15270	562 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	SLC16A4	O15374	487 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	NASP	P49321	788 aa	Predicted RBP	19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	CDR1	P51861	262 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	BFSP1	Q12934	665 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	MAPK7	Q13164	816 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	PKP1	Q13835	747 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	DHX8	Q14562	1220 aa	Known RBP	19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	MGAT5B	Q3V5L5	792 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	SLC39A12	Q504Y0	691 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	CYP2U1	Q7Z449	544 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	MAB21L3	Q8N8X9	362 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	OR10T2	Q8NGX3	314 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	GIPC2	Q8TF65	315 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	EXOC4	Q96A65	974 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	ACD	Q96AP0	544 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	EPSTI1	Q96J88	318 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	CLIC6	Q96NY7	704 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	NTPCR	Q9BSD7	190 aa	Known RBP	19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	RUSC1	Q9BVN2	902 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	CCSER1	Q9C0I3	900 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	KCND2	Q9NZV8	630 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	KLK13	Q9UKR3	277 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	CFAP45	Q9UL16	551 aa		19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	UBQLN1	Q9UMX0	589 aa	Known RBP	19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	19.92	■□□□□ 0.78
LTBP4-231	ENST00000602251	PPEF2	O14830	753 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	KRT18	P05783	430 aa	Known RBP	19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	CLTA	P09496	248 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	PLCG1	P19174	1290 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	GUCY2F	P51841	1108 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	LILRA4	P59901	499 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	MCL1	Q07820	350 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	RAD51AP2	Q09MP3	1159 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	PDGFRL	Q15198	375 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	TAF12	Q16514	161 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	ATL3	Q6DD88	541 aa		19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	CC2D1A	Q6P1N0	951 aa	Predicted RBP	19.91	■□□□□ 0.78
LTBP4-231	ENST00000602251	C1orf186	Q6ZWK4	172 aa		19.91	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms