RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 MUC3BQ9H195 1237 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 RIPK3Q9Y572 518 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 LLGL2Q6P1M3 1020 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 ZNF410Q86VK4 478 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 SUDS3Q9H7L9 328 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 LAMB4A4D0S4 1761 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 SMTNL2Q2TAL5 461 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 FAM171A1Q5VUB5 890 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 PHLDB3Q6NSJ2 640 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 RBBP8NLQ8NC74 664 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 ATG4AQ8WYN0 398 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 BLOC1S4Q9NUP1 217 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 GLI3P10071 1580 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 FAM237AA0A1B0GTK4 181 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 RNF225M0QZC1 329 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 GPR25O00155 361 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 COPEO14579 308 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 ITGA8P53708 1063 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 CAV1Q03135 178 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 VSIG10LQ86VR7 867 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 CALR3Q96L12 384 aaKnown RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 MED15Q96RN5 788 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 MRPL9Q9BYD2 267 aaKnown RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 PFDN4Q9NQP4 134 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 MMP3P08254 477 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 TMPRSS15P98073 1019 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 AP1B1Q10567 949 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 THOC5Q13769 683 aaKnown RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 TRIM72Q6ZMU5 477 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 CCDC60Q8IWA6 550 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 C4orf33Q8N1A6 199 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 PLEKHA5Q9HAU0 1116 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 KLHL8Q9P2G9 620 aaPredicted RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 EPHB6O15197 1021 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 CXCL8P10145 99 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 RPAINQ86UA6 219 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 MORC4Q8TE76 937 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 MAML3Q96JK9 1138 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 XPO6Q96QU8 1125 aaKnown RBP11.6□□□□□ -0.55
ZNF558-207ENST00000601372 FSD1LQ9BXM9 530 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 CYP4F11Q9HBI6 524 aa11.6□□□□□ -0.55
ZNF558-207ENST00000601372 SEPT4O43236 478 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 LUC7L3O95232 432 aaKnown RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 PDHA1P08559 390 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 RAP1GAPP47736 663 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 HARS2P49590 506 aaKnown RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 MAPRE1Q15691 268 aaKnown RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 MIIPQ5JXC2 388 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 SLC47A2Q86VL8 602 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 CD302Q8IX05 232 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 FAM167BQ9BTA0 163 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 SLC4A7Q9Y6M7 1214 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 GRAP2O75791 330 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 S100BP04271 92 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 LBX1P52954 281 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 NOL9Q5SY16 702 aaKnown RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 MTHFD1LQ6UB35 978 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 PCGF5Q86SE9 256 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 TNS4Q8IZW8 715 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 PPM1NQ8N819 430 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 CBWD1Q9BRT8 395 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 ERP44Q9BS26 406 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 RSAD1Q9HA92 442 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 CPSF2Q9P2I0 782 aaKnown RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 PRMT2P55345 433 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 ROR1Q01973 937 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 KIF2BQ8N4N8 673 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 DSEQ9UL01 958 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 PPME1Q9Y570 386 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 TIMM13Q9Y5L4 95 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 TLL2Q9Y6L7 1015 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 DCTN3O75935 186 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 COILP38432 576 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 TMEM119Q4V9L6 283 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 ATL2Q8NHH9 583 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 SMYD3Q9H7B4 428 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 DPP7Q9UHL4 492 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 NUP98P52948 1817 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 SMIM24O75264 130 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 MMEL1Q495T6 779 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 ZNF280DQ6N043 979 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 RNF19AQ9NV58 838 aa11.59□□□□□ -0.55
ZNF558-207ENST00000601372 ZMYND8Q9ULU4 1186 aaPredicted RBP11.59□□□□□ -0.55
ZNF558-207ENST00000601372 KLRG2A4D1S0 409 aaPredicted RBP11.58□□□□□ -0.55
ZNF558-207ENST00000601372 SLITRK3O94933 977 aa11.58□□□□□ -0.55
ZNF558-207ENST00000601372 AGBL2Q5U5Z8 902 aa11.58□□□□□ -0.55
ZNF558-207ENST00000601372 SLC27A1Q6PCB7 646 aa11.58□□□□□ -0.55
ZNF558-207ENST00000601372 TMBIM4Q9HC24 238 aa11.58□□□□□ -0.55
ZNF558-207ENST00000601372 USP20Q9Y2K6 914 aa11.58□□□□□ -0.55
ZNF558-207ENST00000601372 RGPD1P0DJD0 1748 aa11.58□□□□□ -0.56
ZNF558-207ENST00000601372 KLRC4O43908 158 aa11.58□□□□□ -0.56
ZNF558-207ENST00000601372 CAND2O75155 1236 aa11.58□□□□□ -0.56
ZNF558-207ENST00000601372 GNRH1P01148 92 aa11.58□□□□□ -0.56
ZNF558-207ENST00000601372 MBL2P11226 248 aaPredicted RBP11.58□□□□□ -0.56
ZNF558-207ENST00000601372 STILQ15468 1287 aa11.58□□□□□ -0.56
ZNF558-207ENST00000601372 WDR59Q6PJI9 974 aa11.58□□□□□ -0.56
ZNF558-207ENST00000601372 IL31RAQ8NI17 732 aa11.58□□□□□ -0.56
ZNF558-207ENST00000601372 PPTC7Q8NI37 304 aa11.58□□□□□ -0.56
ZNF558-207ENST00000601372 SLC7A14Q8TBB6 771 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms