RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CDH9Q9ULB4 789 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 SORCS3Q9UPU3 1222 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 CTNND2Q9UQB3 1225 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 PATJQ8NI35 1801 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 GPR37L1O60883 481 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 PHACTR2O75167 634 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 COL4A2P08572 1712 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 EPB41P11171 864 aaKnown RBP16.85■□□□□ 0.29
RPS28-203ENST00000600659 KRT13P13646 458 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 PCSK1P29120 753 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 PPP1R2P41236 205 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 CDH8P55286 799 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 TNNC1P63316 161 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 CFAP221Q4G0U5 840 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 CBWD6Q4V339 395 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 CBWD3Q5JTY5 395 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 CBWD5Q5RIA9 395 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 KLHL10Q6JEL2 608 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 SCARA5Q6ZMJ2 495 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 STKLD1Q8NE28 680 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 ST13P5Q8NFI4 369 aaPredicted RBP16.85■□□□□ 0.29
RPS28-203ENST00000600659 SHKBP1Q8TBC3 707 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 SEMA4DQ92854 862 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 FGF14Q92915 247 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 SLC35C1Q96A29 364 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 MYLPFQ96A32 169 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 MMS19Q96T76 1030 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 SEPT5Q99719 369 aaPredicted RBP16.85■□□□□ 0.29
RPS28-203ENST00000600659 PI4K2AQ9BTU6 479 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 IL21Q9HBE4 155 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 TMEM8AQ9HCN3 771 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 ABCB6Q9NP58 842 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 TMEM30AQ9NV96 361 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 KIF26AQ9ULI4 1882 aaPredicted RBP16.85■□□□□ 0.29
RPS28-203ENST00000600659 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
RPS28-203ENST00000600659 PCDHB5Q9Y5E4 795 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
RPS28-203ENST00000600659 NCANO14594 1321 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 KMT2EQ8IZD2 1858 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 MICAL2O94851 1124 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 PDGFRBP09619 1106 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 CYP2F1P24903 491 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 GTF2H1P32780 548 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 PIK3CAP42336 1068 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 TUFMP49411 452 aaKnown RBP16.84■□□□□ 0.29
RPS28-203ENST00000600659 PLD1Q13393 1074 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 STIM1Q13586 685 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 NFE2Q16621 373 aaPredicted RBP16.84■□□□□ 0.29
RPS28-203ENST00000600659 MGAT5BQ3V5L5 792 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 ZNF667Q5HYK9 610 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 GAREM2Q75VX8 874 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 DNAJB7Q7Z6W7 309 aaPredicted RBP16.84■□□□□ 0.29
RPS28-203ENST00000600659 CEP63Q96MT8 703 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 RPP25Q9BUL9 199 aaKnown RBP16.84■□□□□ 0.29
RPS28-203ENST00000600659 MMRN2Q9H8L6 949 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 IGSF9Q9P2J2 1179 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 MRPS23Q9Y3D9 190 aaKnown RBP16.84■□□□□ 0.29
RPS28-203ENST00000600659 ZFP37Q9Y6Q3 630 aaPredicted RBP16.84■□□□□ 0.29
RPS28-203ENST00000600659 NUMBLQ9Y6R0 609 aa16.84■□□□□ 0.29
RPS28-203ENST00000600659 MYH10P35580 1976 aa16.83■□□□□ 0.29
RPS28-203ENST00000600659 NARSO43776 548 aaKnown RBP16.83■□□□□ 0.28
RPS28-203ENST00000600659 HMGA1P17096 107 aaKnown RBP16.83■□□□□ 0.28
RPS28-203ENST00000600659 GJA1P17302 382 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 FCARP24071 287 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 GNL1P36915 607 aaPredicted RBP16.83■□□□□ 0.28
RPS28-203ENST00000600659 ALDH1A3P47895 512 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 MXI1P50539 228 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 EPHB3P54753 998 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 STX17P56962 302 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 NOP14P78316 857 aaKnown RBP16.83■□□□□ 0.28
RPS28-203ENST00000600659 PAK1Q13153 545 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 MTMR3Q13615 1198 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 SGSM1Q2NKQ1 1148 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 SDHAF4Q5VUM1 108 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 KRT39Q6A163 491 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 PARM1Q6UWI2 310 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 FILIP1Q7Z7B0 1213 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 GPR152Q8TDT2 470 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 TAF4BQ92750 862 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 PCED1BQ96HM7 432 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 FUBP3Q96I24 572 aaKnown RBP eCLIP16.83■□□□□ 0.28
RPS28-203ENST00000600659 ZNF512Q96ME7 567 aaPredicted RBP16.83■□□□□ 0.28
RPS28-203ENST00000600659 LRFN3Q9BTN0 628 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 C1QTNF1Q9BXJ1 281 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 BCO2Q9BYV7 579 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.83■□□□□ 0.281e-18■■■■■ 447.2
RPS28-203ENST00000600659 ASAH2Q9NR71 780 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 HMGXB4Q9UGU5 601 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 ASB3Q9Y575 518 aa16.83■□□□□ 0.28
RPS28-203ENST00000600659 COL4A3Q01955 1670 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 CACNA2D1P54289 1103 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 SIGLEC14Q08ET2 396 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 IQCEQ6IPM2 695 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 TRIM67Q6ZTA4 783 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 PDZD4Q76G19 769 aaPredicted RBP16.82■□□□□ 0.28
RPS28-203ENST00000600659 TMEM150AQ86TG1 271 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 ELMOD1Q8N336 334 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 LEMD2Q8NC56 503 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 B3GALNT2Q8NCR0 500 aa16.82■□□□□ 0.28
RPS28-203ENST00000600659 OR6B3Q8NGW1 331 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms