RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, human

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-222	ENST00000600320	RFX1	P22670	979 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	NRIP1	P48552	1158 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	JAM2	P57087	298 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	GPR17	Q13304	367 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	SLC39A12	Q504Y0	691 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	MDH1B	Q5I0G3	518 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	GPIHBP1	Q8IV16	184 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	TTC39C	Q8N584	583 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	B3GALNT2	Q8NCR0	500 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	TMEM176A	Q96HP8	235 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	CEP72	Q9P209	647 aa		21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	PRRC2B	Q5JSZ5	2229 aa	Known RBP	21.32	■■□□□ 1
SHKBP1-222	ENST00000600320	ITIH6	Q6UXX5	1313 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	MTMR11	A4FU01	709 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	GOLGA6L3	A6NEY3	463 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320		F8VZ95	297 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	TGM5	O43548	720 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	KRT5	P13647	590 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	TRIM21	P19474	475 aa	Known RBP	21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	CLCN4	P51793	760 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	RBM10	P98175	930 aa	Known RBP	21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	HYAL1	Q12794	435 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	LILRA6	Q6PI73	481 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	DCP1B	Q8IZD4	617 aa	Known RBP	21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	C12orf29	Q8N999	325 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	VN1R2	Q8NFZ6	395 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	BAP1	Q92560	729 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	MYLPF	Q96A32	169 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	GRPEL1	Q9HAV7	217 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	ACP6	Q9NPH0	428 aa		21.31	■■□□□ 1
SHKBP1-222	ENST00000600320	ABLIM3	O94929	683 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	SEC24A	O95486	1093 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	SPATA31D3	P0C874	917 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	EPCAM	P16422	314 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	USP8	P40818	1118 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	FIGN	Q5HY92	759 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	SPATA31D4	Q6ZUB0	917 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	FAM71A	Q8IYT1	594 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	TTC9B	Q8N6N2	239 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	ATAD1	Q8NBU5	361 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	MYCBPAP	Q8TBZ2	947 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	PCED1B	Q96HM7	432 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	TNIP3	Q96KP6	325 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	ZSWIM1	Q9BR11	485 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	B3GNT5	Q9BYG0	378 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	CRISPLD1	Q9H336	500 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	FAM49B	Q9NUQ9	324 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	DAAM1	Q9Y4D1	1078 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	HCFC2	Q9Y5Z7	792 aa		21.3	■■□□□ 1
SHKBP1-222	ENST00000600320	CLDN5	O00501	218 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	CYP26A1	O43174	497 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	GLUD1	P00367	558 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	CCDC130	P13994	396 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	ADCY1	Q08828	1119 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	KCNC3	Q14003	757 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	SPECC1L	Q69YQ0	1117 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	PAQR9	Q6ZVX9	377 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	CACNA2D4	Q7Z3S7	1137 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	MICALL1	Q8N3F8	863 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	ZNF461	Q8TAF7	563 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	TFAP2B	Q92481	460 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	MRFAP1L1	Q96HT8	127 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	HEXIM2	Q96MH2	286 aa	Known RBP	21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	SPAG5	Q96R06	1193 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	NUP58	Q9BVL2	599 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	RHOBTB2	Q9BYZ6	727 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	IGFLR1	Q9H665	355 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	AFF4	Q9UHB7	1163 aa	Known RBP	21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	FBXW11	Q9UKB1	542 aa		21.29	■■□□□ 1
SHKBP1-222	ENST00000600320	LINC01565	O15544	149 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	ADCY5	O95622	1261 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	GYPC	P04921	128 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	PAEP	P09466	180 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	BRD2	P25440	801 aa	Known RBP	21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	CLCN1	P35523	988 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	TPGS2	Q68CL5	300 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	LLGL2	Q6P1M3	1020 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	TMC6	Q7Z403	805 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	FUK	Q8N0W3	1084 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	CDCA3	Q99618	268 aa	Predicted RBP	21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	ZNF518B	Q9C0D4	1074 aa		21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	ABI2	Q9NYB9	513 aa	Predicted RBP	21.28	■■□□□ 1
SHKBP1-222	ENST00000600320	GFPT2	O94808	682 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	GLP2R	O95838	553 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	ATF2	P15336	505 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	CD19	P15391	556 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	FOSL2	P15408	326 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	SOX5	P35711	763 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	STAT1	P42224	750 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	CYP27A1	Q02318	531 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	NFE2	Q16621	373 aa	Predicted RBP	21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	E4F1	Q66K89	784 aa	Predicted RBP	21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	PPFIBP1	Q86W92	1011 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	SPATA2L	Q8IUW3	424 aa	Predicted RBP	21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	KREMEN2	Q8NCW0	462 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	SLC2A14	Q8TDB8	520 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	CPLX3	Q8WVH0	158 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	PPP2R3C	Q969Q6	453 aa		21.27	■■□□□ 1
SHKBP1-222	ENST00000600320	CYFIP2	Q96F07	1278 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms