RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 PUM1Q14671 1186 aaKnown RBP eCLIP20.32■□□□□ 0.843e-6■□□□□ 9.1
SNRPA-204ENST00000598452 PPP2R5DQ14738 602 aa20.32■□□□□ 0.84
SNRPA-204ENST00000598452 RSPO4Q2I0M5 234 aaPredicted RBP20.32■□□□□ 0.84
SNRPA-204ENST00000598452 LMBRD2Q68DH5 695 aaPredicted RBP20.32■□□□□ 0.84
SNRPA-204ENST00000598452 C1orf228Q6PIY5 440 aa20.32■□□□□ 0.84
SNRPA-204ENST00000598452 OSTM1Q86WC4 334 aa20.32■□□□□ 0.84
SNRPA-204ENST00000598452 RALGPS2Q86X27 583 aaPredicted RBP20.32■□□□□ 0.84
SNRPA-204ENST00000598452 CMTM8Q8IZV2 173 aa20.32■□□□□ 0.84
SNRPA-204ENST00000598452 MAB21L3Q8N8X9 362 aa20.32■□□□□ 0.84
SNRPA-204ENST00000598452 CACTINQ8WUQ7 758 aaKnown RBP20.32■□□□□ 0.84
SNRPA-204ENST00000598452 HPS3Q969F9 1004 aa20.32■□□□□ 0.84
SNRPA-204ENST00000598452 DDX43Q9NXZ2 648 aaKnown RBP20.32■□□□□ 0.84
SNRPA-204ENST00000598452 SIX4Q9UIU6 781 aa20.32■□□□□ 0.84
SNRPA-204ENST00000598452 MAGED2Q9UNF1 606 aaPredicted RBP20.32■□□□□ 0.84
SNRPA-204ENST00000598452 CCL26Q9Y258 94 aa20.32■□□□□ 0.84
SNRPA-204ENST00000598452 MED19A0JLT2 244 aaPredicted RBP20.31■□□□□ 0.84
SNRPA-204ENST00000598452 CHURC1-FNTBB4DL54 471 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 HUS1O60921 280 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 F11P03951 625 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 KRT19P08727 400 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 FNTBP49356 437 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 TXNDC8Q6A555 127 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 SPEM1Q8N4L4 309 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 CELF5Q8N6W0 485 aaKnown RBP20.31■□□□□ 0.84
SNRPA-204ENST00000598452 MTMR12Q9C0I1 747 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 LRRC27Q9C0I9 530 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 GKN1Q9NS71 199 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 DLL3Q9NYJ7 618 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 GTF3C4Q9UKN8 822 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 SNX9Q9Y5X1 595 aa20.31■□□□□ 0.84
SNRPA-204ENST00000598452 STX6O43752 255 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 PDIA4P13667 645 aaKnown RBP20.3■□□□□ 0.84
SNRPA-204ENST00000598452 TGM1P22735 817 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 CYP2F1P24903 491 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 NASPP49321 788 aaPredicted RBP20.3■□□□□ 0.84
SNRPA-204ENST00000598452 PLCB2Q00722 1185 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 SRSF5Q13243 272 aaKnown RBP20.3■□□□□ 0.84
SNRPA-204ENST00000598452 STK38Q15208 465 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 NFE2Q16621 373 aaPredicted RBP20.3■□□□□ 0.84
SNRPA-204ENST00000598452 DDR2Q16832 855 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 INTS6LQ5JSJ4 861 aaKnown RBP20.3■□□□□ 0.84
SNRPA-204ENST00000598452 GPD1LQ8N335 351 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 LRRC52Q8N7C0 313 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 USP13Q92995 863 aaPredicted RBP20.3■□□□□ 0.84
SNRPA-204ENST00000598452 SECISBP2LQ93073 1101 aaKnown RBP20.3■□□□□ 0.84
SNRPA-204ENST00000598452 ACBD6Q9BR61 282 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 THG1LQ9NWX6 298 aaKnown RBP20.3■□□□□ 0.84
SNRPA-204ENST00000598452 ZMYM5Q9UJ78 669 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 ITGA11Q9UKX5 1188 aa20.3■□□□□ 0.84
SNRPA-204ENST00000598452 PTPRJQ12913 1337 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 K7ESF4 209 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 TMEM191BP0C7N4 346 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 AVPR1AP37288 418 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 RBP5P82980 135 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 ITPRIPL2Q3MIP1 535 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 DGKKQ5KSL6 1271 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 HEATR6Q6AI08 1181 aaKnown RBP20.29■□□□□ 0.84
SNRPA-204ENST00000598452 TRIM68Q6AZZ1 485 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 PRR23BQ6ZRT6 265 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 STXBP4Q6ZWJ1 553 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 CCDC65Q8IXS2 484 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 LINC00301Q8NCQ3 95 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 RIN3Q8TB24 985 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 PKMYT1Q99640 499 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 FAM83CQ9BQN1 747 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 TMEM206Q9H813 350 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 PARD6AQ9NPB6 346 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 HPS4Q9NQG7 708 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 GDAP2Q9NXN4 497 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 TFIP11Q9UBB9 837 aaKnown RBP20.29■□□□□ 0.84
SNRPA-204ENST00000598452 GMEB2Q9UKD1 530 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 USP18Q9UMW8 372 aa20.29■□□□□ 0.84
SNRPA-204ENST00000598452 OTOL1A6NHN0 477 aaPredicted RBP20.28■□□□□ 0.84
SNRPA-204ENST00000598452 KIAA0391O15091 583 aaKnown RBP20.28■□□□□ 0.84
SNRPA-204ENST00000598452 HRO43593 1189 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 TADA3O75528 432 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 CSH1P0DML2 217 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 CSH2P0DML3 217 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 MYL7Q01449 175 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 CCINQ13939 588 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 CBWD2Q8IUF1 395 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 ADGRF2Q8IZF7 708 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 TMEM86AQ8N2M4 240 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 OR5B17Q8NGF7 314 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 LEO1Q8WVC0 666 aaPredicted RBP20.28■□□□□ 0.84
SNRPA-204ENST00000598452 EBF3Q9H4W6 596 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 INTS13Q9NVM9 706 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 RAB23Q9ULC3 237 aa20.28■□□□□ 0.84
SNRPA-204ENST00000598452 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.84
SNRPA-204ENST00000598452 ATP2C2O75185 946 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 HOXD13P35453 343 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 RUNX3Q13761 415 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 E2F4Q16254 413 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 SOWAHAQ2M3V2 549 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 MON1AQ86VX9 555 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 TOP6BLQ8N6T0 577 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 GPR161Q8N6U8 529 aaKnown RBP20.27■□□□□ 0.84
SNRPA-204ENST00000598452 MRPS31Q92665 395 aaKnown RBP20.27■□□□□ 0.84
SNRPA-204ENST00000598452 CHFRQ96EP1 664 aa20.27■□□□□ 0.84
SNRPA-204ENST00000598452 ABCB6Q9NP58 842 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms