RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 LRRC63Q05C16 580 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 STIM1Q13586 685 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 HTR4Q13639 388 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 NFE2Q16621 373 aaPredicted RBP24.4■■□□□ 1.5
IRF3-220ENST00000598108 SGSM1Q2NKQ1 1148 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 CYP4A22Q5TCH4 519 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 PARM1Q6UWI2 310 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 PDZD4Q76G19 769 aaPredicted RBP24.4■■□□□ 1.5
IRF3-220ENST00000598108 TMC8Q8IU68 726 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 OR6B3Q8NGW1 331 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 GPR152Q8TDT2 470 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 MCRS1Q96EZ8 462 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 SYT15Q9BQS2 421 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 SDCBP2Q9H190 292 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 SNX25Q9H3E2 840 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 MMRN2Q9H8L6 949 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 ZNF334Q9HCZ1 680 aaPredicted RBP24.4■■□□□ 1.5
IRF3-220ENST00000598108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.4■■□□□ 1.53e-7■■■■■ 53.4
IRF3-220ENST00000598108 IGSF9Q9P2J2 1179 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 CDH9Q9ULB4 789 aa24.4■■□□□ 1.5
IRF3-220ENST00000598108 LRRN2O75325 713 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 CYP2F1P24903 491 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 TDGQ13569 410 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 MTMR3Q13615 1198 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 ZNF667Q5HYK9 610 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 SPOPLQ6IQ16 392 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 TTI2Q6NXR4 508 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 SLC44A3Q8N4M1 653 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 TAS1R2Q8TE23 839 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 GIPC2Q8TF65 315 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 NELFBQ8WX92 580 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 PSMG2Q969U7 264 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 ASAH2Q9NR71 780 aa24.39■■□□□ 1.49
IRF3-220ENST00000598108 MYO10Q9HD67 2058 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 ZNF197O14709 1029 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 ASS1P00966 412 aaKnown RBP24.38■■□□□ 1.49
IRF3-220ENST00000598108 RAP1GAPP47736 663 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 SDHAF4Q5VUM1 108 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 SCARA5Q6ZMJ2 495 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 UBALD2Q8IYN6 164 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 FGF14Q92915 247 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 ASIC4Q96FT7 647 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 ZSWIM3Q96MP5 696 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 DPEP3Q9H4B8 488 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 CLSTN2Q9H4D0 955 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 APOBEC3GQ9HC16 384 aaKnown RBP24.38■■□□□ 1.49
IRF3-220ENST00000598108 TMEM8AQ9HCN3 771 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 ASB3Q9Y575 518 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 NUMBLQ9Y6R0 609 aa24.38■■□□□ 1.49
IRF3-220ENST00000598108 TMEM221A6NGB7 291 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 M0R296 226 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 SLC16A3O15427 465 aaKnown RBP24.37■■□□□ 1.49
IRF3-220ENST00000598108 NARSO43776 548 aaKnown RBP24.37■■□□□ 1.49
IRF3-220ENST00000598108 MICAL2O94851 1124 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 GTF2H1P32780 548 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 PPP1R2P41236 205 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 PIK3CAP42336 1068 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 SIGLEC14Q08ET2 396 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 DDR2Q16832 855 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 SHKBP1Q8TBC3 707 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 FAM200AQ8TCP9 573 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 SEMA4DQ92854 862 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 NXPE3Q969Y0 559 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 ABCB6Q9NP58 842 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 GDE1Q9NZC3 331 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 CTNND2Q9UQB3 1225 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 DOCK8Q8NF50 2099 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 TECTAO75443 2155 aa24.37■■□□□ 1.49
IRF3-220ENST00000598108 CLSTN1O94985 981 aa24.36■■□□□ 1.49
IRF3-220ENST00000598108 STX17P56962 302 aa24.36■■□□□ 1.49
IRF3-220ENST00000598108 HFE2Q6ZVN8 426 aa24.36■■□□□ 1.49
IRF3-220ENST00000598108 GAREM2Q75VX8 874 aa24.36■■□□□ 1.49
IRF3-220ENST00000598108 SPATA2LQ8IUW3 424 aaPredicted RBP24.36■■□□□ 1.49
IRF3-220ENST00000598108 LEMD2Q8NC56 503 aa24.36■■□□□ 1.49
IRF3-220ENST00000598108 STKLD1Q8NE28 680 aa24.36■■□□□ 1.49
IRF3-220ENST00000598108 TAF4BQ92750 862 aa24.36■■□□□ 1.49
IRF3-220ENST00000598108 MYLPFQ96A32 169 aa24.36■■□□□ 1.49
IRF3-220ENST00000598108 A0A1W2PRU2 124 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 A8MXQ7 604 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 PRR33A8MZF0 331 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 PTPN1P18031 435 aaKnown RBP24.35■■□□□ 1.49
IRF3-220ENST00000598108 TEAD2Q15562 447 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 CFAP221Q4G0U5 840 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 MDH1BQ5I0G3 518 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 KRT39Q6A163 491 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 FILIP1Q7Z7B0 1213 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 ITIH5Q86UX2 942 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 TRIML1Q8N9V2 468 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 MYCBPAPQ8TBZ2 947 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 IL21Q9HBE4 155 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 DUSP12Q9UNI6 340 aa24.35■■□□□ 1.49
IRF3-220ENST00000598108 HMGA1P17096 107 aaKnown RBP24.34■■□□□ 1.49
IRF3-220ENST00000598108 ASPAP45381 313 aa24.34■■□□□ 1.49
IRF3-220ENST00000598108 VEPH1Q14D04 833 aa24.34■■□□□ 1.49
IRF3-220ENST00000598108 PCED1BQ96HM7 432 aa24.34■■□□□ 1.49
IRF3-220ENST00000598108 FUBP3Q96I24 572 aaKnown RBP eCLIP24.34■■□□□ 1.49
IRF3-220ENST00000598108 CEP63Q96MT8 703 aa24.34■■□□□ 1.49
IRF3-220ENST00000598108 KXD1Q9BQD3 176 aa24.34■■□□□ 1.49
IRF3-220ENST00000598108 MAGEC2Q9UBF1 373 aaPredicted RBP24.34■■□□□ 1.49
IRF3-220ENST00000598108 ARMCX3Q9UH62 379 aaPredicted RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms