RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 TRDMT1O14717 391 aaKnown RBP18.31■□□□□ 0.52
PNKP-210ENST00000597965 HUS1O60921 280 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 DRD1P21728 446 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 MYL7Q01449 175 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 DMWDQ09019 674 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 ALCAMQ13740 583 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 ZNF268Q14587 947 aaPredicted RBP18.31■□□□□ 0.52
PNKP-210ENST00000597965 PDGFRLQ15198 375 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 SF3A1Q15459 793 aaKnown RBP18.31■□□□□ 0.52
PNKP-210ENST00000597965 TMEM196Q5HYL7 178 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 IL31Q6EBC2 164 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 MAB21L3Q8N8X9 362 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 FSIP1Q8NA03 581 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 GAB3Q8WWW8 586 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 ACCSQ96QU6 501 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 R3HCC1Q9Y3T6 440 aaKnown RBP18.31■□□□□ 0.52
PNKP-210ENST00000597965 PCDHB13Q9Y5F0 798 aa18.31■□□□□ 0.52
PNKP-210ENST00000597965 ZNF638Q14966 1978 aaKnown RBP18.31■□□□□ 0.52
PNKP-210ENST00000597965 PRPF40AO75400 957 aaKnown RBP18.3■□□□□ 0.52
PNKP-210ENST00000597965 RPP40O75818 363 aaKnown RBP18.3■□□□□ 0.52
PNKP-210ENST00000597965 CCDC192P0DO97 292 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 PDCP20941 246 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 LIMK1P53667 647 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 PPM1JQ5JR12 505 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 LRRTM3Q86VH5 581 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 MON1AQ86VX9 555 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 LRRC52Q8N7C0 313 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 C12orf50Q8NA57 414 aaPredicted RBP18.3■□□□□ 0.52
PNKP-210ENST00000597965 TRMT2BQ96GJ1 504 aaKnown RBP18.3■□□□□ 0.52
PNKP-210ENST00000597965 ITGA11Q9UKX5 1188 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 PCDHGA5Q9Y5G8 931 aa18.3■□□□□ 0.52
PNKP-210ENST00000597965 CACNA1BQ00975 2339 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 DENND4CQ5VZ89 1909 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 F11P03951 625 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 HMGA1P17096 107 aaKnown RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 LHX1P48742 406 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 PDE6CP51160 858 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 TFAMQ00059 246 aaKnown RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 SRSF5Q13243 272 aaKnown RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 AASDHQ4L235 1098 aaPredicted RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 WDR44Q5JSH3 913 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 L1TD1Q5T7N2 865 aaKnown RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 CRELD2Q6UXH1 353 aaPredicted RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 SV2BQ7L1I2 683 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 DYMQ7RTS9 669 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 SFR1Q86XK3 245 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 EFCAB13Q8IY85 973 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 CPA6Q8N4T0 437 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 LRRC15Q8TF66 581 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 USP13Q92995 863 aaPredicted RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 SMG9Q9H0W8 520 aaKnown RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 EBF3Q9H4W6 596 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 TMEM206Q9H813 350 aa18.29■□□□□ 0.52
PNKP-210ENST00000597965 DDX43Q9NXZ2 648 aaKnown RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 MAGED2Q9UNF1 606 aaPredicted RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 KIF26AQ9ULI4 1882 aaPredicted RBP18.29■□□□□ 0.52
PNKP-210ENST00000597965 ACACBO00763 2458 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 KIAA0391O15091 583 aaKnown RBP18.28■□□□□ 0.52
PNKP-210ENST00000597965 PPP1R37O75864 691 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 ZNF806P0C7X5 589 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 GARTP22102 1010 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 PCSK1P29120 753 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 ADSSP30520 456 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 POLR2BP30876 1174 aaKnown RBP18.28■□□□□ 0.52
PNKP-210ENST00000597965 FAM160A1Q05DH4 1040 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 RRAGBQ5VZM2 374 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 SYCP3Q8IZU3 236 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 PDCL2Q8N4E4 241 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 FUBP3Q96I24 572 aaKnown RBP eCLIP18.28■□□□□ 0.52
PNKP-210ENST00000597965 MYRFLQ96LU7 910 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 FAM213AQ9BRX8 229 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 PI4K2AQ9BTU6 479 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 OLFML3Q9NRN5 406 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 RBAKQ9NYW8 714 aaPredicted RBP18.28■□□□□ 0.52
PNKP-210ENST00000597965 AGAP1Q9UPQ3 857 aa18.28■□□□□ 0.52
PNKP-210ENST00000597965 SPAG17Q6Q759 2223 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 GREB1Q4ZG55 1949 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 TISP43B9A030 160 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 TULP1O00294 542 aaPredicted RBP18.27■□□□□ 0.52
PNKP-210ENST00000597965 EXTL3O43909 919 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 GCNT3O95395 438 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 ITGB3P05106 788 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 USP17L7P0C7H9 530 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 RBP5P82980 135 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 GRIN1Q05586 938 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 MYO1EQ12965 1108 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 NR1H3Q13133 447 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 CFAP221Q4G0U5 840 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 TXNDC8Q6A555 127 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 CCDC73Q6ZRK6 1079 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 STXBP4Q6ZWJ1 553 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 TMEM150AQ86TG1 271 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 SPATA2LQ8IUW3 424 aaPredicted RBP18.27■□□□□ 0.52
PNKP-210ENST00000597965 BRSK2Q8IWQ3 736 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 CSGALNACT2Q8N6G5 542 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 TOP6BLQ8N6T0 577 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 ATP2A3Q93084 1043 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 CEP295NLQ96MC4 621 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 P2RY13Q9BPV8 354 aa18.27■□□□□ 0.52
PNKP-210ENST00000597965 STRA6Q9BX79 667 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms