RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 ATP2A3Q93084 1043 aa10.97□□□□□ -0.65
TRIM28-210ENST00000597618 RUSC1Q9BVN2 902 aa10.97□□□□□ -0.65
TRIM28-210ENST00000597618 NUSAP1Q9BXS6 441 aaKnown RBP10.97□□□□□ -0.65
TRIM28-210ENST00000597618 RAB34Q9BZG1 259 aa10.97□□□□□ -0.65
TRIM28-210ENST00000597618 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
TRIM28-210ENST00000597618 ECT2Q9H8V3 914 aa10.97□□□□□ -0.65
TRIM28-210ENST00000597618 KLK13Q9UKR3 277 aa10.97□□□□□ -0.65
TRIM28-210ENST00000597618 INVSQ9Y283 1065 aa10.97□□□□□ -0.65
TRIM28-210ENST00000597618 LACTBL1A8MY62 500 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 E9PMD0 336 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 PPEF2O14830 753 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 F11P03951 625 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 HAPLN1P10915 354 aaPredicted RBP10.96□□□□□ -0.65
TRIM28-210ENST00000597618 PLS3P13797 630 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 BCKDHBP21953 392 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 GUCY2CP25092 1073 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.65
TRIM28-210ENST00000597618 DPP6P42658 865 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 PDIA5Q14554 519 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 TRIM61Q5EBN2 209 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 TTC38Q5R3I4 469 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 SPATA1Q5VX52 437 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 LMBRD2Q68DH5 695 aaPredicted RBP10.96□□□□□ -0.65
TRIM28-210ENST00000597618 TXNDC8Q6A555 127 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 ANO7Q6IWH7 933 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 RINT1Q6NUQ1 792 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 C1orf186Q6ZWK4 172 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 MON1AQ86VX9 555 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 METTL23Q86XA0 190 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 THEM5Q8N1Q8 247 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 RIN3Q8TB24 985 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 OSCP1Q8WVF1 389 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 BICD1Q96G01 975 aa10.96□□□□□ -0.65
TRIM28-210ENST00000597618 DUS2Q9NX74 493 aaKnown RBP10.96□□□□□ -0.65
TRIM28-210ENST00000597618 CELSR3Q9NYQ7 3312 aa10.96□□□□□ -0.66
TRIM28-210ENST00000597618 ASCC3Q8N3C0 2202 aaKnown RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 SFI1A8K8P3 1242 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 UPK3BL1B0FP48 263 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 UPK3BL2E5RIL1 263 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 H0YCG3 227 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 TNFRSF10BO14763 440 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 JAK2O60674 1132 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 ALDH1A2O94788 518 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 HMGA1P17096 107 aaKnown RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 TNFSF9P41273 254 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 MAPK8P45983 427 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 IFNAR2P48551 515 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 TRAPPC10P48553 1259 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 SIM1P81133 766 aaPredicted RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 NR1H3Q13133 447 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 ENOX2Q16206 610 aaKnown RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 C9orf57Q5W0N0 161 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 KRT79Q5XKE5 535 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 LPCAT2Q7L5N7 544 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 PROSER1Q86XN7 944 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 CD302Q8IX05 232 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 IGSF22Q8N9C0 903 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 MDGA1Q8NFP4 955 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 USP33Q8TEY7 942 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 SPACA7Q96KW9 195 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 HAPLN2Q9GZV7 340 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 FOXP1Q9H334 677 aaPredicted RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 TMEM206Q9H813 350 aa10.95□□□□□ -0.66
TRIM28-210ENST00000597618 RPF1Q9H9Y2 349 aaKnown RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 ABI2Q9NYB9 513 aaPredicted RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 UXTQ9UBK9 157 aaPredicted RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 HELZ2Q9BYK8 2649 aaKnown RBP10.95□□□□□ -0.66
TRIM28-210ENST00000597618 ATG2BQ96BY7 2078 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 NUP205Q92621 2012 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 ASH1LQ9NR48 2969 aaKnown RBP10.94□□□□□ -0.66
TRIM28-210ENST00000597618 SPAARA0A1B0GVQ0 90 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 FAM221BA6H8Z2 402 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 PIRO00625 290 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 HNRNPDLO14979 420 aaKnown RBP10.94□□□□□ -0.66
TRIM28-210ENST00000597618 OGTO15294 1046 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 FAM189A1O60320 539 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 ADRB2P07550 413 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 CSH1P0DML2 217 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 CSH2P0DML3 217 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 ENGP17813 658 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 HOXD12P35452 270 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 LIG4P49917 911 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 CDR1P51861 262 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 USP4Q13107 963 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 ZNF77Q15935 545 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 CRY1Q16526 586 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 ME3Q16798 604 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 EML3Q32P44 896 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 JADE1Q6IE81 842 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 PIP4P1Q86T03 277 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 SYT12Q8IV01 421 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 DCP1BQ8IZD4 617 aaKnown RBP10.94□□□□□ -0.66
TRIM28-210ENST00000597618 OLIG1Q8TAK6 271 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 WHAMMQ8TF30 809 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 MMP17Q9ULZ9 603 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 NOL7Q9UMY1 257 aaKnown RBP10.94□□□□□ -0.66
TRIM28-210ENST00000597618 MAGED2Q9UNF1 606 aaPredicted RBP10.94□□□□□ -0.66
TRIM28-210ENST00000597618 DERAQ9Y315 318 aa10.94□□□□□ -0.66
TRIM28-210ENST00000597618 PCDHB5Q9Y5E4 795 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms