RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 MYBPHLA2RUH7 354 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 ATP2C2O75185 946 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 C8AP07357 584 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 HOXB8P17481 243 aaPredicted RBP15.3■□□□□ 0.04
VRK3-213ENST00000597215 PTPN1P18031 435 aaKnown RBP15.3■□□□□ 0.04
VRK3-213ENST00000597215 RFX1P22670 979 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 MFAP3P55082 362 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 UVSSAQ2YD98 709 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 MDH1BQ5I0G3 518 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 ANKRD54Q6NXT1 300 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 C4orf50Q6ZRC1 276 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 SPATA2LQ8IUW3 424 aaPredicted RBP15.3■□□□□ 0.04
VRK3-213ENST00000597215 TCEAL8Q8IYN2 117 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 UBR7Q8N806 425 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 MYCBPAPQ8TBZ2 947 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 KAT5Q92993 513 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 JAKMIP2Q96AA8 810 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 ERGIC2Q96RQ1 377 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 CYP4F11Q9HBI6 524 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 SIX2Q9NPC8 291 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 PLCB1Q9NQ66 1216 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 CRTAC1Q9NQ79 661 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 BRWD1Q9NSI6 2320 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 TMLHEQ9NVH6 421 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 ZDHHC7Q9NXF8 308 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 ABI2Q9NYB9 513 aaPredicted RBP15.3■□□□□ 0.04
VRK3-213ENST00000597215 HSFX1Q9UBD0 423 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 GTF3C4Q9UKN8 822 aa15.3■□□□□ 0.04
VRK3-213ENST00000597215 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.29■□□□□ 0.04
VRK3-213ENST00000597215 ZMYND10O75800 440 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 LTBRP36941 435 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 APBA1Q02410 837 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 ORC1Q13415 861 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 SYCP1Q15431 976 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 ZNF394Q53GI3 561 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 PPM1LQ5SGD2 360 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 KLHDC7AQ5VTJ3 777 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 GJB7Q6PEY0 223 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 ACOT1Q86TX2 421 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 CRYBG2Q8N1P7 616 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 ATAD1Q8NBU5 361 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 SLC7A14Q8TBB6 771 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 MYLPFQ96A32 169 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 FUBP3Q96I24 572 aaKnown RBP eCLIP15.29■□□□□ 0.04
VRK3-213ENST00000597215 PCMTD1Q96MG8 357 aaPredicted RBP15.29■□□□□ 0.04
VRK3-213ENST00000597215 KREMEN1Q96MU8 473 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 TWNKQ96RR1 684 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 ELOVL4Q9GZR5 314 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 ABCB6Q9NP58 842 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 CLEC1BQ9P126 229 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 SIK3Q9Y2K2 1263 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 PCDHB4Q9Y5E5 795 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 PRUNE2Q8WUY3 3088 aa15.29■□□□□ 0.04
VRK3-213ENST00000597215 COL6A3P12111 3177 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 ATP8B3O60423 1300 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 PTPRDP23468 1912 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 TEX33O43247 280 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 SEC24AO95486 1093 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 VNN2O95498 520 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 HNRNPA1P09651 372 aaKnown RBP eCLIP15.28■□□□□ 0.04
VRK3-213ENST00000597215 ACO1P21399 889 aaKnown RBP15.28■□□□□ 0.04
VRK3-213ENST00000597215 KCNA5P22460 613 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 HOXA9P31269 272 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 TUFMP49411 452 aaKnown RBP15.28■□□□□ 0.04
VRK3-213ENST00000597215 UBASH3AP57075 661 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 CYP27A1Q02318 531 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 DLX2Q07687 328 aaPredicted RBP15.28■□□□□ 0.04
VRK3-213ENST00000597215 DUSP4Q13115 394 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 ARHGAP44Q17R89 818 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 CCDC142Q17RM4 750 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 MGAT5BQ3V5L5 792 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 CFAP221Q4G0U5 840 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 SMYD5Q6GMV2 418 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 DPY19L2P1Q6NXN4 242 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 TMEM270Q6UE05 265 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 CMASQ8NFW8 434 aaPredicted RBP15.28■□□□□ 0.04
VRK3-213ENST00000597215 PCED1BQ96HM7 432 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 TMEM176AQ96HP8 235 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 MSLNLQ96KJ4 702 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 NAP1L5Q96NT1 182 aaPredicted RBP15.28■□□□□ 0.04
VRK3-213ENST00000597215 CD207Q9UJ71 328 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 DAAM1Q9Y4D1 1078 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 INSL5Q9Y5Q6 135 aa15.28■□□□□ 0.04
VRK3-213ENST00000597215 A0A1W2PQC6 194 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.04
VRK3-213ENST00000597215 RFPL2O75678 378 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 LRG1P02750 347 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 TPM3P06753 285 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 HAPLN1P10915 354 aaPredicted RBP15.27■□□□□ 0.04
VRK3-213ENST00000597215 KRT5P13647 590 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 UCHL3P15374 230 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 MAGEA11P43364 429 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 KLK7P49862 253 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 RAD23BP54727 409 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 ITIH3Q06033 890 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 PLD1Q13393 1074 aa15.27■□□□□ 0.04
VRK3-213ENST00000597215 RAPGEF1Q13905 1077 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms