RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 CYP3A43Q9HB55 503 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 APOBEC3GQ9HC16 384 aaKnown RBP19.5■□□□□ 0.71
ZNF558-204ENST00000596172 HCFC1R1Q9NWW0 138 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 EPS15L1Q9UBC2 864 aa19.5■□□□□ 0.71
ZNF558-204ENST00000596172 P4HA2O15460 535 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 HCRTO43612 131 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 N4BP1O75113 896 aaKnown RBP19.49■□□□□ 0.71
ZNF558-204ENST00000596172 RHOP08100 348 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 CCDC192P0DO97 292 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 ASPAP45381 313 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 CDH8P55286 799 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 NTHL1P78549 312 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 MGAT5BQ3V5L5 792 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 CCDC183Q5T5S1 534 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 SPOPLQ6IQ16 392 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 C4orf50Q6ZRC1 276 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 UNC93AQ86WB7 457 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 TTC9BQ8N6N2 239 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 MYCBPAPQ8TBZ2 947 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 PI4K2AQ9BTU6 479 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 NIF3L1Q9GZT8 377 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 DNAJC25Q9H1X3 360 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 FAM124BQ9H5Z6 455 aaPredicted RBP19.49■□□□□ 0.71
ZNF558-204ENST00000596172 CRTAC1Q9NQ79 661 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 ABI2Q9NYB9 513 aaPredicted RBP19.49■□□□□ 0.71
ZNF558-204ENST00000596172 NME7Q9Y5B8 376 aa19.49■□□□□ 0.71
ZNF558-204ENST00000596172 A8MXQ7 604 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 ZNF197O14709 1029 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 ATP2C2O75185 946 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 PTPN1P18031 435 aaKnown RBP19.48■□□□□ 0.71
ZNF558-204ENST00000596172 MAGEA11P43364 429 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 FMO5P49326 533 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 WDR44Q5JSH3 913 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 ITIH5Q86UX2 942 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 SPATA2LQ8IUW3 424 aaPredicted RBP19.48■□□□□ 0.71
ZNF558-204ENST00000596172 PSMG2Q969U7 264 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 ELMO3Q96BJ8 720 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 MYADMQ96S97 322 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 SEPT5Q99719 369 aaPredicted RBP19.48■□□□□ 0.71
ZNF558-204ENST00000596172 CORO1BQ9BR76 489 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 SDCBP2Q9H190 292 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 CDH7Q9ULB5 785 aa19.48■□□□□ 0.71
ZNF558-204ENST00000596172 C2orf16Q68DN1 1984 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 CLSTN1O94985 981 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 LAMP2P13473 410 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 SP100P23497 879 aaPredicted RBP19.47■□□□□ 0.71
ZNF558-204ENST00000596172 GBP2P32456 591 aaPredicted RBP19.47■□□□□ 0.71
ZNF558-204ENST00000596172 RPL10AP62906 217 aaKnown RBP19.47■□□□□ 0.71
ZNF558-204ENST00000596172 INCA1Q0VD86 236 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 PRSS36Q5K4E3 855 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 CYP4A22Q5TCH4 519 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 VSTM1Q6UX27 236 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 DNAJB7Q7Z6W7 309 aaPredicted RBP19.47■□□□□ 0.71
ZNF558-204ENST00000596172 IRF2BP1Q8IU81 584 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 CRYBG2Q8N1P7 616 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 TTC39CQ8N584 583 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 ITFG1Q8TB96 612 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 TNIP3Q96KP6 325 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 CEP295NLQ96MC4 621 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 LRRC3Q9BY71 257 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 ASAH2Q9NR71 780 aa19.47■□□□□ 0.71
ZNF558-204ENST00000596172 MAGEC2Q9UBF1 373 aaPredicted RBP19.47■□□□□ 0.71
ZNF558-204ENST00000596172 MRPS23Q9Y3D9 190 aaKnown RBP19.47■□□□□ 0.71
ZNF558-204ENST00000596172 DENND4AQ7Z401 1863 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 PI4K2BG5E9Z4 385 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 LRRN2O75325 713 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 SOAT2O75908 522 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 FGF19O95750 216 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 ALADP13716 330 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 ATF6P18850 670 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 CYP2F1P24903 491 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 RAP1GAPP47736 663 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 PSMC1P62191 440 aaKnown RBP19.46■□□□□ 0.71
ZNF558-204ENST00000596172 CETN1Q12798 172 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 VEPH1Q14D04 833 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 SCARA5Q6ZMJ2 495 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 PDZD4Q76G19 769 aaPredicted RBP19.46■□□□□ 0.71
ZNF558-204ENST00000596172 GET4Q7L5D6 327 aaPredicted RBP19.46■□□□□ 0.71
ZNF558-204ENST00000596172 B3GALNT2Q8NCR0 500 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 FGF13Q92913 245 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 NXPE3Q969Y0 559 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 PCED1BQ96HM7 432 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 THAP9Q9H5L6 903 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 GDE1Q9NZC3 331 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 LIMD1Q9UGP4 676 aa19.46■□□□□ 0.71
ZNF558-204ENST00000596172 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.46■□□□□ 0.71
ZNF558-204ENST00000596172 NDST1P52848 882 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 KCNH2Q12809 1159 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 CCDC142Q17RM4 750 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 SLC5A9Q2M3M2 681 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 MDH1BQ5I0G3 518 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 SASS6Q6UVJ0 657 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 TMC8Q8IU68 726 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 HS6ST3Q8IZP7 471 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 KHSRPQ92945 711 aaKnown RBP eCLIP19.45■□□□□ 0.7
ZNF558-204ENST00000596172 MYLPFQ96A32 169 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 DPEP3Q9H4B8 488 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 IGSF9Q9P2J2 1179 aa19.45■□□□□ 0.7
ZNF558-204ENST00000596172 ANHXE9PGG2 379 aa19.44■□□□□ 0.7
ZNF558-204ENST00000596172 DCXO43602 365 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms