RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 IQUBQ8NA54 791 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 BPIFB1Q8TDL5 484 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 ANKRD36BP1Q96IX9 119 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 ACBD6Q9BR61 282 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 PRMT8Q9NR22 394 aaPredicted RBP18.3■□□□□ 0.52
CCDC9-202ENST00000595659 PCDHGA2Q9Y5H1 932 aa18.3■□□□□ 0.52
CCDC9-202ENST00000595659 MYBPHLA2RUH7 354 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 SPECC1L-ADORA2AF8WAN1 911 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 CLIC2O15247 247 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 TGFB1I1O43294 461 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 ATP2C2O75185 946 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 ZSCAN22P10073 491 aaPredicted RBP18.29■□□□□ 0.52
CCDC9-202ENST00000595659 ID4P47928 161 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 PKP1Q13835 747 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 GAS6Q14393 721 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 SOWAHAQ2M3V2 549 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 ARHGAP29Q52LW3 1261 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 WDR44Q5JSH3 913 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 INTS6LQ5JSJ4 861 aaKnown RBP18.29■□□□□ 0.52
CCDC9-202ENST00000595659 FAM26FQ5R3K3 315 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 TXNDC8Q6A555 127 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 CMTM8Q8IZV2 173 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 ZBTB44Q8NCP5 570 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 RUBCNQ92622 972 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 HPDLQ96IR7 371 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 CUEDC2Q9H467 287 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 GDAP2Q9NXN4 497 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 CCL26Q9Y258 94 aa18.29■□□□□ 0.52
CCDC9-202ENST00000595659 R3HCC1Q9Y3T6 440 aaKnown RBP18.29■□□□□ 0.52
CCDC9-202ENST00000595659 F13A1P00488 732 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 TNNC2P02585 160 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 F11P03951 625 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 LMO2P25791 158 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 CTHP32929 405 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 AFMP43652 599 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 ME1P48163 572 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 CYP2J2P51589 502 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 PSMC1P62191 440 aaKnown RBP18.28■□□□□ 0.52
CCDC9-202ENST00000595659 SATB1Q01826 763 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 PON2Q15165 354 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 EPM2AIP1Q7L775 607 aaPredicted RBP18.28■□□□□ 0.52
CCDC9-202ENST00000595659 SCN4BQ8IWT1 228 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 TMEM86AQ8N2M4 240 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 TOP6BLQ8N6T0 577 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 TTC16Q8NEE8 873 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 ZNF507Q8TCN5 953 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 PKMYT1Q99640 499 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 C7orf25Q9BPX7 421 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 C8orf33Q9H7E9 229 aaPredicted RBP18.28■□□□□ 0.52
CCDC9-202ENST00000595659 GKN1Q9NS71 199 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 OBP2AQ9NY56 170 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 PCDHA7Q9UN72 937 aa18.28■□□□□ 0.52
CCDC9-202ENST00000595659 SCN1AP35498 2009 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 KIAA0391O15091 583 aaKnown RBP18.27■□□□□ 0.52
CCDC9-202ENST00000595659 PDGFRBP09619 1106 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 CSH1P0DML2 217 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 CSH2P0DML3 217 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 DLATP10515 647 aaKnown RBP18.27■□□□□ 0.52
CCDC9-202ENST00000595659 HOXC13P31276 330 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 AVPR1AP37288 418 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 LHX1P48742 406 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 MYO1EQ12965 1108 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 DUOXA2Q1HG44 320 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 TRIM68Q6AZZ1 485 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 Q6ZS52 159 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 SPATA2LQ8IUW3 424 aaPredicted RBP18.27■□□□□ 0.52
CCDC9-202ENST00000595659 GRAMD1CQ8IYS0 662 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 CELF5Q8N6W0 485 aaKnown RBP18.27■□□□□ 0.52
CCDC9-202ENST00000595659 SCFD1Q8WVM8 642 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 NELL1Q92832 810 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 USP13Q92995 863 aaPredicted RBP18.27■□□□□ 0.52
CCDC9-202ENST00000595659 CCDC127Q96BQ5 260 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 SLC39A2Q9NP94 309 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 AGPAT3Q9NRZ7 376 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 NCDNQ9UBB6 729 aa18.27■□□□□ 0.52
CCDC9-202ENST00000595659 TSC2P49815 1807 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 GABRDO14764 452 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 EIF3DO15371 548 aaKnown RBP eCLIP18.26■□□□□ 0.51
CCDC9-202ENST00000595659 TDGF1P13385 188 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 WEE1P30291 646 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 CXCL12P48061 93 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 MLLT6P55198 1093 aaPredicted RBP18.26■□□□□ 0.51
CCDC9-202ENST00000595659 RPL10AP62906 217 aaKnown RBP18.26■□□□□ 0.51
CCDC9-202ENST00000595659 CUL4BQ13620 913 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 SURF1Q15526 300 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 SNRNP35Q16560 246 aaKnown RBP18.26■□□□□ 0.51
CCDC9-202ENST00000595659 LPAL2Q16609 132 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 UNC13DQ70J99 1090 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 RALGPS2Q86X27 583 aaPredicted RBP18.26■□□□□ 0.51
CCDC9-202ENST00000595659 LEO1Q8WVC0 666 aaPredicted RBP18.26■□□□□ 0.51
CCDC9-202ENST00000595659 KBTBD7Q8WVZ9 684 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 MRPS31Q92665 395 aaKnown RBP18.26■□□□□ 0.51
CCDC9-202ENST00000595659 RMDN1Q96DB5 314 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 MMS19Q96T76 1030 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 EBF3Q9H4W6 596 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 TRPC7Q9HCX4 862 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 C2orf42Q9NWW7 574 aa18.26■□□□□ 0.51
CCDC9-202ENST00000595659 THG1LQ9NWX6 298 aaKnown RBP18.26■□□□□ 0.51
CCDC9-202ENST00000595659 RIF1Q5UIP0 2472 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms