RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 C4orf50Q6ZRC1 276 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 APBB1IPQ7Z5R6 666 aaPredicted RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 NAT8LQ8N9F0 302 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 BANPQ8N9N5 519 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 PYROXD1Q8WU10 500 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 ZNF606Q8WXB4 792 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 DNAJC9Q8WXX5 260 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 BTBD10Q9BSF8 475 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 TRIM55Q9BYV6 548 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 GLIS2Q9BZE0 524 aaPredicted RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 POLR3FQ9H1D9 316 aaPredicted RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 GINM1Q9NU53 330 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 MTO1Q9Y2Z2 717 aaKnown RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 IVNS1ABPQ9Y6Y0 642 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 CLRN2A0PK11 232 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 SGK1O00141 431 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 HAUS5O94927 633 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 NPTXRO95502 500 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 LINGO3P0C6S8 592 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 DHRS4L1P0CG22 281 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 FGFR1P11362 822 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 ETS1P14921 441 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 PCK1P35558 622 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 PTDSS1P48651 473 aaKnown RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 NLRP11P59045 1033 aaKnown RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 NOP14P78316 857 aaKnown RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 TAZQ16635 292 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 ATP13A4Q4VNC1 1196 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 ARHGEF16Q5VV41 709 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 SPOPLQ6IQ16 392 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 MTMR14Q8NCE2 650 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 TMEM35BQ8NCS4 154 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 PTCD3Q96EY7 689 aaKnown RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 PAFAH2Q99487 392 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 NPHS2Q9NP85 383 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 CYP26B1Q9NR63 512 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 RBAKQ9NYW8 714 aaPredicted RBP13.92□□□□□ -0.18
VRK3-209ENST00000594948 KANSL3Q9P2N6 904 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 POLIQ9UNA4 740 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 PTPRJQ12913 1337 aa13.92□□□□□ -0.18
VRK3-209ENST00000594948 COL11A1P12107 1806 aaPredicted RBP13.91□□□□□ -0.18
VRK3-209ENST00000594948 ADRA1DP25100 572 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 VHLP40337 213 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 CCNHP51946 323 aaPredicted RBP13.91□□□□□ -0.18
VRK3-209ENST00000594948 RPL7AP62424 266 aaKnown RBP13.91□□□□□ -0.18
VRK3-209ENST00000594948 GRM1Q13255 1194 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 ZRSR2Q15696 482 aaKnown RBP13.91□□□□□ -0.18
VRK3-209ENST00000594948 ZFYVE27Q5T4F4 411 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 IRGCQ6NXR0 463 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 MTDHQ86UE4 582 aaKnown RBP13.91□□□□□ -0.18
VRK3-209ENST00000594948 VSIG10LQ86VR7 867 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 TCP10LQ8TDR4 215 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 DCAKDQ8WVC6 231 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 NSL1Q96IY1 281 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 GMLQ99445 158 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 MANSC1Q9H8J5 431 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 RAVER2Q9HCJ3 691 aaKnown RBP13.91□□□□□ -0.18
VRK3-209ENST00000594948 KLHL11Q9NVR0 708 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 PGAP2Q9UHJ9 254 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 ZNRF3Q9ULT6 936 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 SSC5DA1L4H1 1573 aa13.91□□□□□ -0.18
VRK3-209ENST00000594948 TESPA1A2RU30 521 aaPredicted RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 C3orf70A6NLC5 250 aaPredicted RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 KLF11O14901 512 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 SPAG6O75602 509 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 TCF4P15884 667 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 KCNA2P16389 499 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 CTCFP49711 727 aaPredicted RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 ARFIP2P53365 341 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 SOX10P56693 466 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 WNT7BP56706 349 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 OCRLQ01968 901 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 KLC1Q07866 573 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 PLEKHG4Q58EX7 1191 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 LMBRD2Q68DH5 695 aaPredicted RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 DCUN1D2Q6PH85 259 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 BBS12Q6ZW61 710 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 CPXCR1Q8N123 301 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.9□□□□□ -0.18
VRK3-209ENST00000594948 TTC8Q8TAM2 541 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 CPT1BQ92523 772 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 SKA1Q96BD8 255 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 ZNF333Q96JL9 665 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 CADM1Q9BY67 442 aaKnown RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 PCDHGC3Q9UN70 934 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 CNTNAP2Q9UHC6 1331 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 IQANK1A0A1B0GTG1 560 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 LRRD1A4D1F6 860 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 LOC285556D6RIA3 1793 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 NVLO15381 856 aaKnown RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 SKAP2O75563 359 aaPredicted RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 KRT7P08729 469 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 ATP4AP20648 1035 aa13.9□□□□□ -0.18
VRK3-209ENST00000594948 EIF4BP23588 611 aaKnown RBP13.9□□□□□ -0.18
VRK3-209ENST00000594948 NAMPTP43490 491 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms