RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 FSTL4Q6MZW2 842 aa18.84■□□□□ 0.61
RETREG3-212ENST00000593251 DCP1BQ8IZD4 617 aaKnown RBP18.84■□□□□ 0.61
RETREG3-212ENST00000593251 RIN3Q8TB24 985 aa18.84■□□□□ 0.61
RETREG3-212ENST00000593251 USP13Q92995 863 aaPredicted RBP18.84■□□□□ 0.61
RETREG3-212ENST00000593251 EPSTI1Q96J88 318 aa18.84■□□□□ 0.61
RETREG3-212ENST00000593251 FAM84AQ96KN4 292 aa18.84■□□□□ 0.61
RETREG3-212ENST00000593251 CCSER1Q9C0I3 900 aa18.84■□□□□ 0.61
RETREG3-212ENST00000593251 ST6GALNAC4Q9H4F1 302 aa18.84■□□□□ 0.61
RETREG3-212ENST00000593251 PCDHB5Q9Y5E4 795 aa18.84■□□□□ 0.61
RETREG3-212ENST00000593251 HELZP42694 1942 aaKnown RBP18.84■□□□□ 0.61
RETREG3-212ENST00000593251 ACACBO00763 2458 aa18.83■□□□□ 0.61
RETREG3-212ENST00000593251 PRPF40AO75400 957 aaKnown RBP18.83■□□□□ 0.6
RETREG3-212ENST00000593251 ARSAP15289 507 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 ABCD1P33897 745 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 DDIT3P35638 169 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 KCNA1Q09470 495 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 SMARCB1Q12824 385 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 BFSP1Q12934 665 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 SF3A2Q15428 464 aaKnown RBP18.83■□□□□ 0.6
RETREG3-212ENST00000593251 TMEM196Q5HYL7 178 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 ZNF720Q7Z2F6 126 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 KRI1Q8N9T8 703 aaKnown RBP18.83■□□□□ 0.6
RETREG3-212ENST00000593251 ARRDC1-AS1Q9H2J1 176 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 TBC1D7Q9P0N9 293 aa18.83■□□□□ 0.6
RETREG3-212ENST00000593251 IL18RAPO95256 599 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 BMP15O95972 392 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 EGFP01133 1207 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 ACAT1P24752 427 aaKnown RBP18.82■□□□□ 0.6
RETREG3-212ENST00000593251 POLR2BP30876 1174 aaKnown RBP18.82■□□□□ 0.6
RETREG3-212ENST00000593251 HOXA6P31267 233 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 TFAMQ00059 246 aaKnown RBP18.82■□□□□ 0.6
RETREG3-212ENST00000593251 TSPY1Q01534 308 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 PTPAQ15257 358 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 DDR2Q16832 855 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 CCDC142Q17RM4 750 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 NAIF1Q69YI7 327 aaPredicted RBP18.82■□□□□ 0.6
RETREG3-212ENST00000593251 TTC16Q8NEE8 873 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 GAB3Q8WWW8 586 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 SAAL1Q96ER3 474 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 ZNF560Q96MR9 790 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 FAM213AQ9BRX8 229 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 FBRSL1Q9HCM7 1045 aaKnown RBP18.82■□□□□ 0.6
RETREG3-212ENST00000593251 TDP1Q9NUW8 608 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 AGAP1Q9UPQ3 857 aa18.82■□□□□ 0.6
RETREG3-212ENST00000593251 LAMA1P25391 3075 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 RNF40O75150 1001 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 RPP40O75818 363 aaKnown RBP18.81■□□□□ 0.6
RETREG3-212ENST00000593251 PPP1R37O75864 691 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 ITGB3P05106 788 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 GRSF1Q12849 480 aaKnown RBP eCLIP18.81■□□□□ 0.6
RETREG3-212ENST00000593251 AASDHQ4L235 1098 aaPredicted RBP18.81■□□□□ 0.6
RETREG3-212ENST00000593251 KBTBD6Q86V97 674 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 PDCL2Q8N4E4 241 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 MRPS31Q92665 395 aaKnown RBP18.81■□□□□ 0.6
RETREG3-212ENST00000593251 MRPL44Q9H9J2 332 aaKnown RBP18.81■□□□□ 0.6
RETREG3-212ENST00000593251 RXFP3Q9NSD7 469 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 L1RE1Q9UN81 338 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 SLC8A2Q9UPR5 921 aa18.81■□□□□ 0.6
RETREG3-212ENST00000593251 MAP1BP46821 2468 aaKnown RBP18.81■□□□□ 0.6
RETREG3-212ENST00000593251 TRDMT1O14717 391 aaKnown RBP18.8■□□□□ 0.6
RETREG3-212ENST00000593251 HCRTO43612 131 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 TADA3O75528 432 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 CSH1P0DML2 217 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 CSH2P0DML3 217 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 CCDC192P0DO97 292 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 CYP2F1P24903 491 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 DDX6P26196 483 aaKnown RBP eCLIP18.8■□□□□ 0.6
RETREG3-212ENST00000593251 POSTNQ15063 836 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 CC2D1AQ6P1N0 951 aaPredicted RBP18.8■□□□□ 0.6
RETREG3-212ENST00000593251 BRAPQ7Z569 592 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 MON1AQ86VX9 555 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 C1orf127Q8N9H9 656 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 NOC3LQ8WTT2 800 aaKnown RBP18.8■□□□□ 0.6
RETREG3-212ENST00000593251 HVCN1Q96D96 273 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 STRA6Q9BX79 667 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 SMOC1Q9H4F8 434 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 TRPC7Q9HCX4 862 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 DDX43Q9NXZ2 648 aaKnown RBP18.8■□□□□ 0.6
RETREG3-212ENST00000593251 ZMYM5Q9UJ78 669 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 CLIC4Q9Y696 253 aa18.8■□□□□ 0.6
RETREG3-212ENST00000593251 PTPRDP23468 1912 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 GOLGA8IPA6NC78 632 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 MYMKA6NI61 221 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 GOLGA8JA6NMD2 632 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 PNPLA4P41247 253 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 GALK1P51570 392 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 CASP5P51878 434 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 POU5F1Q01860 360 aaKnown RBP18.79■□□□□ 0.6
RETREG3-212ENST00000593251 NFE2Q16621 373 aaPredicted RBP18.79■□□□□ 0.6
RETREG3-212ENST00000593251 CACNA2D4Q7Z3S7 1137 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 OSTM1Q86WC4 334 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 NT5DC4Q86YG4 428 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 BRSK2Q8IWQ3 736 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 ACCSQ96QU6 501 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 HHIPQ96QV1 700 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 SLC22A12Q96S37 553 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 CYP2S1Q96SQ9 504 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 KIF9Q9HAQ2 790 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 GTF3C4Q9UKN8 822 aa18.79■□□□□ 0.6
RETREG3-212ENST00000593251 CHD8Q9HCK8 2581 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms